RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 C1orf122Q6ZSJ8 110 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 FAM185AQ8N0U4 392 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 OR13C9Q8NGT0 318 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 SLC25A28Q96A46 364 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 SPSB1Q96BD6 273 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 OPALINQ96PE5 141 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 SPACA5Q96QH8 159 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 IL36RNQ9UBH0 155 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 NKX1-2Q9UD57 310 aaPredicted RBP18.83■□□□□ 0.6
LSM4-201ENST00000252816 FBN3Q75N90 2809 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 A0A0U1RQK1 487 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 TK1P04183 234 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 COL10A1Q03692 680 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 IL18R1Q13478 541 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 LAIR2Q6ISS4 152 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 CRIP3Q6Q6R5 217 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 LHFPL2Q6ZUX7 228 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 OR4M1Q8NGD0 313 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 RGP1Q92546 391 aaPredicted RBP18.82■□□□□ 0.6
LSM4-201ENST00000252816 RFT1Q96AA3 541 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 NOX4Q9NPH5 578 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 RBFOX1Q9NWB1 397 aaKnown RBP18.82■□□□□ 0.6
LSM4-201ENST00000252816 CLEC2DQ9UHP7 191 aa18.82■□□□□ 0.6
LSM4-201ENST00000252816 DIMT1Q9UNQ2 313 aaKnown RBP18.82■□□□□ 0.6
LSM4-201ENST00000252816 CAB39Q9Y376 341 aaPredicted RBP18.82■□□□□ 0.6
LSM4-201ENST00000252816 TRBV2A0A0J9YWF9 115 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 H0YAE9 185 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 SPRY1O43609 319 aaPredicted RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 MT-ND2P03891 347 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 MELTFP08582 738 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 HKR1P10072 659 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 BCL3P20749 454 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 RPL31P62899 125 aaKnown RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 PDZK1IP1Q13113 114 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 MKXQ8IYA7 352 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 HAVCR2Q8TDQ0 301 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 TAF15Q92804 592 aaKnown RBP eCLIP18.81■□□□□ 0.6
LSM4-201ENST00000252816 EMG1Q92979 244 aaKnown RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 COMMD4Q9H0A8 199 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 ZCCHC4Q9H5U6 513 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 METTL8Q9H825 291 aaKnown RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 UNKLQ9H9P5 680 aaKnown RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 SIRT4Q9Y6E7 314 aaPredicted RBP18.81■□□□□ 0.6
LSM4-201ENST00000252816 HSPE1-MOB4S4R3N1 261 aa18.81■□□□□ 0.6
LSM4-201ENST00000252816 A0A1W2PRD5 423 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 A0A1W2PRF3 423 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 A0A1W2PRM7 423 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 IRGMA1A4Y4 181 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 K7N7A8 449 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 ZNF737O75373 536 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 TMEM200BQ69YZ2 307 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 PNKDQ8N490 385 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 PARP16Q8N5Y8 322 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 RPS4Y2Q8TD47 263 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 GGHQ92820 318 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 FAM234AQ9H0X4 552 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 DCLRE1BQ9H816 532 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 TNFRSF19Q9NS68 423 aa18.8■□□□□ 0.6
LSM4-201ENST00000252816 IGKV1-12A0A0C4DH73 117 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 ANGPTL7O43827 346 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 IGKV1D-12P01611 117 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 CHRM2P08172 466 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 RPSAP08865 295 aaKnown RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 OCM2P0CE71 109 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 OCMP0CE72 109 aaPredicted RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 CALCBP10092 127 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 CFPP27918 469 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 CDK5R1Q15078 307 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 AWAT1Q58HT5 328 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 HCP5Q6MZN7 132 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 RPL22L1Q6P5R6 122 aaKnown RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 TMPRSS11AQ6ZMR5 421 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 SERPINA12Q8IW75 414 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 Q8IYB0 196 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 C8orf59Q8N0T1 100 aaPredicted RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 ASCC1Q8N9N2 400 aaKnown RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 OR5D18Q8NGL1 313 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 FBLIM1Q8WUP2 373 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 TSEN15Q8WW01 171 aaKnown RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 TMEM80Q96HE8 168 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 DHDHQ9UQ10 334 aa18.79■□□□□ 0.6
LSM4-201ENST00000252816 EXOSC1Q9Y3B2 195 aaKnown RBP18.79■□□□□ 0.6
LSM4-201ENST00000252816 TMEM82A0PJX8 343 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 ALX3O95076 343 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 CYB5AP00167 134 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 LALBAP00709 142 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 MYL12AP19105 171 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 DUSP1P28562 367 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 GUCA2AQ02747 115 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 GABPB1Q06547 395 aaPredicted RBP18.78■□□□□ 0.6
LSM4-201ENST00000252816 BLMHQ13867 455 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 ZNF273Q14593 569 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 CCDC58Q4VC31 144 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 C16orf87Q6PH81 154 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 FAM58AQ8N1B3 248 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 C11orf42Q8N5U0 333 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 OR5D14Q8NGL3 314 aa18.78■□□□□ 0.6
LSM4-201ENST00000252816 NPFFO15130 113 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 XPNPEP2O43895 674 aa18.77■□□□□ 0.6
LSM4-201ENST00000252816 HAND1O96004 215 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms