RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 OR4A47Q6IF82 309 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 OR4A4PQ8NGN8 299 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 ROBO4Q8WZ75 1007 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 ZNF775Q96BV0 537 aaPredicted RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 ZG16BQ96DA0 208 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 HPXP02790 462 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 DNAJB12Q9NXW2 375 aaKnown RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 RALYQ9UKM9 306 aaKnown RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 SSC5DA1L4H1 1573 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 TRIP12Q14669 1992 aaPredicted RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 KCNAB3O43448 404 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 RAE1P78406 368 aaKnown RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 DHRS13Q6UX07 377 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 OR52L2PQ8NGH6 319 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 HES4Q9HCC6 221 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 ZNF253O75346 499 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 ABHD14BQ96IU4 210 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 TECRQ9NZ01 308 aaKnown RBP7.34□□□□□ -1.23
APOB-201ENST00000233242 ORM1P02763 201 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 SERF2P84101 59 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 NKAIN1Q4KMZ8 207 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 NRXN3Q9Y4C0 1643 aa7.34□□□□□ -1.23
APOB-201ENST00000233242 HEATR5BQ9P2D3 2071 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 A0A1B0GU03 582 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 DIRC3C9JPN6 131 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 MMP9P14780 707 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 ADPRHP54922 357 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 ELOVL1Q9BW60 279 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 MBNL1Q9NR56 388 aaKnown RBP7.34□□□□□ -1.24
APOB-201ENST00000233242 SCN4AP35499 1836 aa7.34□□□□□ -1.24
APOB-201ENST00000233242 SOCS7O14512 581 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 BCAT2O15382 392 aaPredicted RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 PITX3O75364 302 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 HMGA1P17096 107 aaKnown RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 TMEM267Q0VDI3 215 aaPredicted RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 SP6Q3SY56 376 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 RPS19BP1Q86WX3 136 aaKnown RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 TP53I13Q8NBR0 393 aaPredicted RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 VN1R1Q9GZP7 353 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TBC1D29Q9UFV1 150 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ANXA10Q9UJ72 324 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 SIRPB1O00241 398 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PCP4P48539 62 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TIAL1Q01085 375 aaKnown RBP eCLIP7.33□□□□□ -1.246e-7■■■■■ 27
APOB-201ENST00000233242 C20orf141Q9NUB4 165 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MED29Q9NX70 200 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TDRD6O60522 2096 aaKnown RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 FAM221AA4D161 298 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 EPPINO95925 133 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 OR2T6Q8NHC8 308 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ORAI1Q96D31 301 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 OR2A5Q96R48 311 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PRDM7Q9NQW5 492 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 NOTCH3Q9UM47 2321 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 HLA-DQB1P01920 261 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 NDUFB7P17568 137 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 NUBPLQ8TB37 319 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 SLC37A2Q8TED4 501 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MS4A3Q96HJ5 214 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 FUT9Q9Y231 359 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 CCL26Q9Y258 94 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 AMDHD2Q9Y303 409 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ZNF638Q14966 1978 aaKnown RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 SP1P08047 785 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 INSL4Q14641 139 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.33□□□□□ -1.242e-28■■■□□ 17.2
APOB-201ENST00000233242 IP6K3Q96PC2 410 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 CORTO00230 105 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 GYPAP02724 150 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 HSPB1P04792 205 aaKnown RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 BCL3P20749 454 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 B2MP61769 119 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 KMT5CQ86Y97 462 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 STXBP6Q8NFX7 210 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MRGPRX3Q96LB0 322 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TAAR3PQ9P1P4 343 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 IGSF23A1L1A6 192 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 H3BP45 60 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 Q6ZNB5 142 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 BHLHE23Q8NDY6 225 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MENTQ9BUN1 341 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MARCH5Q9NX47 278 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PMCHL1Q16048 86 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 NRSN2Q9GZP1 204 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 SLC25A22Q9H936 323 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TRGV10A0A0A0MS01 117 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ADAP1O75689 374 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 HERVK_113P61574 105 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 DDA1Q9BW61 102 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ARHGEF17Q96PE2 2063 aaPredicted RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 LINC01553A4QN01 128 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PIAS2O75928 621 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 MRGPREQ86SM8 312 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 TBX15Q96SF7 602 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 CYB5R3P00387 301 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms