RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ARHGAP5-AS1Q96IT6 56 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 IL36GQ9NZH8 169 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 JKAMPQ9P055 326 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 HIVEP3Q5T1R4 2406 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 SNRPGP15A8MWD9 76 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ZNF732B4DXR9 585 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ZNF83P51522 516 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 NAAAQ02083 359 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ALKBH6Q3KRA9 238 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ALKBH2Q6NS38 261 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 STEAP1BQ6NZ63 245 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 SLC25A26Q70HW3 274 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 BCL2L14Q9BZR8 327 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 MGAT4CQ9UBM8 478 aa16.84■□□□□ 0.29
TNFRSF1A-201ENST00000162749 MFNGO00587 321 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CREBL2O60519 120 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MPV17P39210 176 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ARPC4P59998 168 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 FJX1Q86VR8 437 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ST6GALNAC3Q8NDV1 305 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 HIST1H2AAQ96QV6 131 aa16.83■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TRGV8A0A0C4DH27 118 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 IQCF6A8MYZ5 107 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GSTP1P09211 210 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 BLVRBP30043 206 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 KDF1Q8NAX2 398 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RND1Q92730 232 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 WDR89Q96FK6 387 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CHIAQ9BZP6 476 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GPN1Q9HCN4 374 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 IGSF10Q6WRI0 2623 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TMEM8BA6NDV4 472 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR5B21A6NL26 309 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 M0R1B8 84 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ELOVL5Q9NYP7 299 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MEMO1Q9Y316 297 aa16.82■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GABRR1P24046 479 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 C3orf36Q3SXR2 165 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TRAPPC6BQ86SZ2 158 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TMEM229BQ8NBD8 167 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR8H1Q8NGG4 311 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 USP24Q9UPU5 2620 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SSX5O60225 188 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CYB5AP00167 134 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SFTPCP11686 197 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TUBG1P23258 451 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 NPBWR2P48146 333 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TAS2R19P59542 299 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TAF9Q16594 264 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MRPS24Q96EL2 167 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CHST6Q9GZX3 395 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TUBG2Q9NRH3 451 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CHD3Q12873 2000 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CFAP46Q8IYW2 2715 aa16.81■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR2A4O95047 310 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RLN1P04808 185 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SELEP16581 610 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SSTR2P30874 369 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CA7P43166 264 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GNG3P63215 75 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PIGYQ3MUY2 71 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SIGIRRQ6IA17 410 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TEX261Q6UWH6 196 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 FBXL14Q8N1E6 418 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OSR2Q8N2R0 312 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GVQW1Q8N7I0 195 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR2A7Q96R45 310 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TINAGL1Q9GZM7 467 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 U3KQ87 197 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ANKHD1Q8IWZ3 2542 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 C16orf97H3BN30 126 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GNG2P59768 71 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 IGFBP7Q16270 282 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PNLIPRP3Q17RR3 467 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 C2orf68Q2NKX9 166 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TMEM211Q6ICI0 200 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 TMEM200AQ86VY9 491 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 BATF2Q8N1L9 274 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 Q8NFD4 153 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ST8SIA4Q92187 359 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF581Q9P0T4 197 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF107Q9UII5 783 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ST3GAL6Q9Y274 331 aa16.8■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SPTBN1Q01082 2364 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 M0QYG6 137 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GEMIN2O14893 280 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RAB3DO95716 219 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CRYAAP02489 173 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF735P0CB33 412 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CASP6P55212 293 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 HAGHLQ6PII5 290 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PCSK4Q6UW60 755 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 C6orf201Q7Z4U5 140 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 C1orf174Q8IYL3 243 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SAXO1Q8IYX7 474 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR4S1Q8NGB4 309 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SLAMF9Q96A28 289 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PECRQ9BY49 303 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms