RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NXNL2Q5VZ03 156 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 ASRGL1Q7L266 308 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 CALHM1Q8IU99 346 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 CFHR4Q92496 578 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 SLC7A6OSQ96CW6 309 aaPredicted RBP14.98□□□□□ -0.01
CLN6-220ENST00000637450 PRRG3Q9BZD7 231 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
CLN6-220ENST00000637450 MRM2Q9UI43 246 aaKnown RBP14.98□□□□□ -0.01
CLN6-220ENST00000637450 SNX5Q9Y5X3 404 aa14.98□□□□□ -0.01
CLN6-220ENST00000637450 A6NIN4 97 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 DHRS7CA6NNS2 312 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 M0R129 80 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 BMXP51813 675 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 LGALS4P56470 323 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 SLX4IPQ5VYV7 408 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 LIAT1Q6ZQX7 453 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 PLEKHG7Q6ZR37 379 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 BATF2Q8N1L9 274 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 TCEANCQ8N8B7 351 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 OR2T6Q8NHC8 308 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 TMEM163Q8TC26 289 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 CLN6Q9NWW5 311 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 OR14J1Q9UGF5 321 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 FOXJ3Q9UPW0 622 aa14.97□□□□□ -0.01
CLN6-220ENST00000637450 FAM90A8PA6NJQ4 464 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 C17orf98A8MV24 154 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 VGLL3A8MV65 326 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 ZNF670-ZNF695F2Z2N8 137 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 K7N7A8 449 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 MITFO75030 526 aaPredicted RBP14.96□□□□□ -0.01
CLN6-220ENST00000637450 CCL1P22362 96 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 COX7A1P24310 79 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 EPHA2P29317 976 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 DLX6P56179 175 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 IL24Q13007 206 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 LHFPL4Q7Z7J7 247 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 ANGPTL5Q86XS5 388 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 KLHDC1Q8N7A1 406 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 PKIBQ9C010 78 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 NPFFR1Q9GZQ6 430 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 SLC22A13Q9Y226 551 aa14.96□□□□□ -0.01
CLN6-220ENST00000637450 ZAR1LA6NP61 321 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 CHST1O43916 411 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 DNAJC8O75937 253 aaPredicted RBP14.95□□□□□ -0.02
CLN6-220ENST00000637450 C12orf73Q69YU5 71 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 HIST2H2BDQ6DRA6 164 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 ZNF782Q6ZMW2 699 aaPredicted RBP14.95□□□□□ -0.02
CLN6-220ENST00000637450 DYNAPQ8N1N2 210 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 C11orf44Q8N8P7 122 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 DTX3Q8N9I9 347 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 KRT84Q9NSB2 600 aa14.95□□□□□ -0.02
CLN6-220ENST00000637450 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLN6-220ENST00000637450 OPN1MWP04001 364 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 OPN1MW2P0DN77 364 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 OPN1MW3P0DN78 364 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 PIPP12273 146 aaPredicted RBP14.94□□□□□ -0.02
CLN6-220ENST00000637450 COL10A1Q03692 680 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 SSX6Q7RTT6 188 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 IL4I1Q96RQ9 567 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 MTCH1Q9NZJ7 389 aa14.94□□□□□ -0.02
CLN6-220ENST00000637450 FAM230AA0A1W2PPH8 454 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 G3V4G9 280 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 ZNF737O75373 536 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 RPP14O95059 124 aaKnown RBP14.93□□□□□ -0.02
CLN6-220ENST00000637450 CHRM2P08172 466 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 RAB13P51153 203 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 UBE2V2Q15819 145 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 ATP6AP1Q15904 470 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 KDM4DQ6B0I6 523 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 CATSPERDQ86XM0 798 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 GID4Q8IVV7 300 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 YIPF7Q8N8F6 280 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 ASCC1Q8N9N2 400 aaKnown RBP14.93□□□□□ -0.02
CLN6-220ENST00000637450 OR13D1Q8NGV5 346 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 TRMT10AQ8TBZ6 339 aaKnown RBP14.93□□□□□ -0.02
CLN6-220ENST00000637450 MALSU1Q96EH3 234 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 CDCA4Q9BXL8 241 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 SLC7A11Q9UPY5 501 aa14.93□□□□□ -0.02
CLN6-220ENST00000637450 TBL2Q9Y4P3 447 aaKnown RBP14.93□□□□□ -0.02
CLN6-220ENST00000637450 TET2Q6N021 2002 aaPredicted RBP14.93□□□□□ -0.02
CLN6-220ENST00000637450 ODF3BA8MYP8 253 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 F8VVB4 439 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 F8VWA3 439 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 G3V2T6 193 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 RBP4P02753 201 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 ARG1P05089 322 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 KRT8P05787 483 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 ZNF728P0DKX0 622 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 VSIG10L2P0DP72 767 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 ODF4Q2M2E3 257 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 BEAN1Q3B7T3 259 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 CCBE1Q6UXH8 406 aaPredicted RBP14.92□□□□□ -0.02
CLN6-220ENST00000637450 Q8N2B8 174 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 OR11H6Q8NGC7 330 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 CEP19Q96LK0 163 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 TBX5Q99593 518 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
CLN6-220ENST00000637450 CADM1Q9BY67 442 aaKnown RBP14.92□□□□□ -0.02
CLN6-220ENST00000637450 ZNF702PQ9H963 129 aa14.92□□□□□ -0.02
CLN6-220ENST00000637450 WARS2Q9UGM6 360 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms