RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NAA60Q9H7X0 242 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 UNKLQ9H9P5 680 aaKnown RBP12.36□□□□□ -0.43
LDB3-209ENST00000623056 FBRSQ9HAH7 460 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 ELOA3CA0A087WX78 387 aaPredicted RBP12.35□□□□□ -0.43
LDB3-209ENST00000623056 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 SLC31A2O15432 143 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 EFNA3P52797 238 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 PKIAP61925 76 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 NKX6-1P78426 367 aaPredicted RBP12.35□□□□□ -0.43
LDB3-209ENST00000623056 IL13RA2Q14627 380 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 SPSB3Q6PJ21 355 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 TMEM234Q8WY98 164 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 TOMM40LQ969M1 308 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
LDB3-209ENST00000623056 C8orf33Q9H7E9 229 aaPredicted RBP12.35□□□□□ -0.43
LDB3-209ENST00000623056 TDRD6O60522 2096 aaKnown RBP12.35□□□□□ -0.43
LDB3-209ENST00000623056 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 CDRT15L2A8MXV6 281 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ADAM10O14672 748 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 MSTNO14793 375 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 CYB5BO43169 146 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 CA11O75493 328 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 TRGC2P03986 189 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 TMEM225BP0DP42 221 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ALDH3B1P43353 468 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 OR14K1Q8NGZ2 314 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 MRGPRX1Q96LB2 322 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 MRPL13Q9BYD1 178 aaKnown RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 SOHLH2Q9NX45 425 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ANXA10Q9UJ72 324 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 DOCK8Q8NF50 2099 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 ZNF724A8MTY0 619 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 RER1O15258 196 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ZNF205O95201 554 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 NDUFB7P17568 137 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 DUSP1P28562 367 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 GABREP78334 506 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 MFAP5Q13361 173 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 PPA1Q15181 289 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ZNF124Q15973 351 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 FBXW12Q6X9E4 464 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ZNF429Q86V71 674 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ZFP62Q8NB50 900 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 C18orf12Q96KH6 178 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
LDB3-209ENST00000623056 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
LDB3-209ENST00000623056 SEC16AO15027 2179 aa12.33□□□□□ -0.43
LDB3-209ENST00000623056 A0A087X0M5 115 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 A0A1B0GX30 115 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 C5orf63A6NC05 138 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 OR5H1A6NKK0 313 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 E9PLN8 166 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 GLI4P10075 376 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 GABRR1P24046 479 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
LDB3-209ENST00000623056 ARL6IP1Q15041 203 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 TMEM176BQ3YBM2 270 aaPredicted RBP12.33□□□□□ -0.44
LDB3-209ENST00000623056 ABCA11PQ4W5N1 156 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 RTL6Q6ICC9 239 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 ZNF283Q8N7M2 679 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 SLC38A9Q8NBW4 561 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 DUSP15Q9H1R2 295 aaPredicted RBP12.33□□□□□ -0.44
LDB3-209ENST00000623056 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
LDB3-209ENST00000623056 SIRT7Q9NRC8 400 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 LIPGQ9Y5X9 500 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 ARGFXA6NJG6 315 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
LDB3-209ENST00000623056 IFNA10P01566 189 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 CTSEP14091 401 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 FABP4P15090 132 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 CLRN1P58418 232 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 TAS2R60P59551 318 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 LIAT1Q6ZQX7 453 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 STX12Q86Y82 276 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 LRTM2Q8N967 370 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 PISDQ9UG56 409 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms