RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KLF10Q13118 480 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 PNLIPRP3Q17RR3 467 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ZFAND6Q6FIF0 208 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ADAMTSL5Q6ZMM2 481 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 NAA40Q86UY6 237 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CYP4Z1Q86W10 505 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 TGIF2LXQ8IUE1 241 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 LAX1Q8IWV1 398 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR2T4Q8NH00 348 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 LZICQ8WZA0 190 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 RPL3LQ92901 407 aaKnown RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 SLAMF6Q96DU3 332 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 UBE2E2Q96LR5 201 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 FNDC11Q9BVV2 318 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CCDC134Q9H6E4 229 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 WDR76Q9H967 626 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ELL3Q9HB65 397 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 KRT84Q9NSB2 600 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 SIGLEC8Q9NYZ4 499 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.57□□□□□ -1.84
SNCA-213ENST00000618500 RHBDD3Q9Y3P4 386 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 I3L521 148 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 DCTN6O00399 190 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR8U9P0C7N5 309 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 TROVE2P10155 538 aaKnown RBP eCLIP3.57□□□□□ -1.84
SNCA-213ENST00000618500 COX7A1P24310 79 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 PSMB8P28062 276 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 MNDAP41218 407 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 SLC15A1P46059 708 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ZNF816Q0VGE8 651 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 CYLC2Q14093 348 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 SSX2Q16385 188 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 TIGD6Q17RP2 521 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 Q3ZCU0 254 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ABCA11PQ4W5N1 156 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ZNF730Q6ZMV8 503 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR8H2Q8N162 312 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 Q8N1Y9 231 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 RNF148Q8N7C7 305 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 FAM86B1Q8N7N1 296 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR51A7Q8NH64 312 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR2AE1Q8NHA4 323 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 C1orf21Q9H246 121 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 GAL3ST2Q9H3Q3 398 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 IER3IP1Q9Y5U9 82 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 KMT2AQ03164 3969 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 IGHV3-64DA0A0J9YX35 117 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 PQLC2LA1A4F0 135 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 NUPR2A6NF83 97 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 NUDT19A8MXV4 375 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CSN2P05814 226 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CCL3L1P16619 93 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 KDELR2P33947 212 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 GSSP48637 474 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ACTA2P62736 377 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ACTG2P63267 376 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ACTC1P68032 377 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ACTA1P68133 377 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 GPR50Q13585 617 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 MEP1BQ16820 701 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 HLA-DRB5Q30154 266 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CORO6Q6QEF8 472 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 HEPN1Q6WQI6 88 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CBLL1Q75N03 491 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ZNF573Q86YE8 665 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 SLC15A3Q8IY34 581 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 Q8IYB0 196 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ZNRF1Q8ND25 227 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 OR2T27Q8NH04 317 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 RNFT2Q96EX2 444 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 THAP7Q9BT49 309 aaPredicted RBP3.56□□□□□ -1.84
SNCA-213ENST00000618500 COPS4Q9BT78 406 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 PAPOLGQ9BWT3 736 aaKnown RBP3.56□□□□□ -1.84
SNCA-213ENST00000618500 WDR13Q9H1Z4 485 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ENPP4Q9Y6X5 453 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 COMMD3-BMI1R4GMX3 469 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ELOA3CA0A087WX78 387 aaPredicted RBP3.56□□□□□ -1.84
SNCA-213ENST00000618500 FUOMA2VDF0 154 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 SMIM23A6NLE4 172 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 BUB1B-PAK6H3BSN5 160 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CXCR6O00574 342 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ANOS1P23352 680 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 TCTAP57738 103 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 SMIM11AP58511 58 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 CDC42P60953 191 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 KIAA0141Q14154 515 aaPredicted RBP3.56□□□□□ -1.84
SNCA-213ENST00000618500 GALEQ14376 348 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 IFI44LQ53G44 452 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 DEGS2Q6QHC5 323 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 LINC00336Q6ZUF6 198 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 SHFQ7M4L6 423 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 TRPM8Q7Z2W7 1104 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 LINC00346Q8IVM7 164 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 LINC00471Q8N535 108 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 FANK1Q8TC84 345 aa3.56□□□□□ -1.84
SNCA-213ENST00000618500 MRPS28Q9Y2Q9 187 aaKnown RBP3.56□□□□□ -1.84
SNCA-213ENST00000618500 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SOCS2O14508 198 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SLC22A2O15244 555 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms