RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SLC7A10Q9NS82 523 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 GKN2Q86XP6 184 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 FBXL6Q8N531 539 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR5AC2Q9NZP5 309 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 M0R296 226 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 APOMO95445 188 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PGA3P0DJD8 388 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 KIR2DS3Q14952 304 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-211ENST00000615798 TPSD1Q9BZJ3 242 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 SH2D2AQ9NP31 389 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM140Q9NV12 185 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 HCRTO43612 131 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 ONECUT2O95948 504 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OVCH2Q7RTZ1 564 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 FOCADQ5VW36 1801 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL12A1-211ENST00000615798 MGAT2Q10469 447 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 VAX2Q9UIW0 290 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 C7orf72A4D263 438 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 SMIM18P0DKX4 95 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM258P61165 79 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PRDX4Q13162 271 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 MDGA1Q8NFP4 955 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR52B4Q8NGK2 314 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR51H1Q8NH63 302 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PHOSPHO2Q8TCD6 241 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PIGAP37287 484 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 NEUROG1Q92886 237 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SERINC2Q96SA4 455 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TRBV23-1A0A0A0MS06 115 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 C7orf77A4D0Y5 90 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 CDK2AP1O14519 115 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 FGF18O76093 207 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 IL10RAQ13651 578 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 LIAT1Q6ZQX7 453 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 PRSS45Q7RTY3 260 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 FAM71CQ8NEG0 241 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 C20orf27Q9GZN8 174 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 BEX4Q9NWD9 120 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TRAV8-7A0A075B6U6 113 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 H0Y980 276 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 NXPH2O95156 264 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 OPRK1P41145 380 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 CDCA3Q99618 268 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-211ENST00000615798 DOCK3Q8IZD9 2030 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 CSNK1EP49674 416 aaKnown RBP8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SSBP2P81877 361 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TCF23Q7RTU1 214 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 LILRA2Q8N149 483 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 PPT2Q9UMR5 302 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SPNP16150 400 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 FRMPD2BQ6IN97 320 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 C17orf99Q6UX52 265 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM167BQ9NRX6 74 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 MEF2AQ02078 507 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SKP2Q13309 424 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 NKAIN2Q5VXU1 208 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TNCP24821 2201 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 M0QZ24 198 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 PSMG4Q5JS54 123 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 PAQR9Q6ZVX9 377 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SPICQ8N5J4 248 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 MRGPRDQ8TDS7 321 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 NGBQ9NPG2 151 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SLC5A10A0PJK1 596 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 P01737 135 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 P04436 131 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 OR8G3PP0DMU2 310 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TCTN1Q2MV58 587 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 LY6G5CQ5SRR4 150 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 OR10X1Q8NGY0 326 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 HBZP02008 142 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TIMD4Q96H15 378 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 SLC17A4Q9Y2C5 497 aa8.36□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM129A0AVI4 362 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF593O00488 134 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TMPRSS11DO60235 418 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 LINC00614P0C842 121 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 EDDM3AQ14507 147 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 PRRT3Q5FWE3 981 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 LRRK1Q38SD2 2015 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ANK1P16157 1881 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TRGC2P03986 189 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CCR5P51681 352 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 GLDNQ6ZMI3 551 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 RPS27LQ71UM5 84 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms