RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 A0A1W2PRM7 423 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 TMPRSS2O15393 492 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 CD226Q15762 336 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 EXOGQ9Y2C4 368 aaKnown RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 UMAD1C9J7I0 102 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 SP1P08047 785 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 SLC37A1P57057 533 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 ZNF239Q16600 458 aaKnown RBP17.9■□□□□ 0.46
CTDP1-208ENST00000613122 PLAC9Q5JTB6 97 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 PDCD6O75340 191 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 OR2D2Q9H210 308 aa17.9■□□□□ 0.46
CTDP1-208ENST00000613122 MPGP29372 298 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 PTPMT1Q8WUK0 201 aaPredicted RBP17.89■□□□□ 0.45
CTDP1-208ENST00000613122 ZNF764Q96H86 408 aaPredicted RBP17.89■□□□□ 0.45
CTDP1-208ENST00000613122 ZNF385DQ9H6B1 395 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 A0A1W2PN81 502 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 F2RL2O00254 374 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 CHRNA7P36544 502 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 H3F3CQ6NXT2 135 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 OR5AP2Q8NGF4 316 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 DNASE2O00115 360 aaPredicted RBP17.89■□□□□ 0.45
CTDP1-208ENST00000613122 ZFPL1O95159 310 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 OR4F17Q8NGA8 305 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 C16orf97H3BN30 126 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 AKR7A2O43488 359 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 PLPP2O43688 288 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 CST2P09228 141 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 PSG6Q00889 435 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 C6orf201Q7Z4U5 140 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 TMEFF2Q9UIK5 374 aaPredicted RBP17.89■□□□□ 0.45
CTDP1-208ENST00000613122 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.89■□□□□ 0.45
CTDP1-208ENST00000613122 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
CTDP1-208ENST00000613122 TCRBV16S1A1N1A0A5B0 115 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 SLC25A32Q9H2D1 315 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 HYAL3O43820 417 aaPredicted RBP17.88■□□□□ 0.45
CTDP1-208ENST00000613122 MLF1P58340 268 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 FOXO1Q12778 655 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 MRM1Q6IN84 353 aaKnown RBP17.88■□□□□ 0.45
CTDP1-208ENST00000613122 MED30Q96HR3 178 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.88■□□□□ 0.45
CTDP1-208ENST00000613122 LAMB2P55268 1798 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 ASB13Q8WXK3 278 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 OR3A1P47881 315 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 LINC00303Q3SY05 128 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 Q6ZNX1 250 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 OR52B4Q8NGK2 314 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 FAM122AQ96E09 287 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 OR51I2Q9H344 312 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 CYR61O00622 381 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 SELENOPP49908 381 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 ATG4DQ86TL0 474 aaPredicted RBP17.88■□□□□ 0.45
CTDP1-208ENST00000613122 NECAP1Q8NC96 275 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 TMEM171Q8WVE6 324 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 PPP1R1CQ8WVI7 109 aa17.88■□□□□ 0.45
CTDP1-208ENST00000613122 LY86O95711 162 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 CD80P33681 288 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 TMPRSS3P57727 454 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 LSM6P62312 80 aaKnown RBP17.87■□□□□ 0.45
CTDP1-208ENST00000613122 CD300LDQ6UXZ3 194 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 GLCCI1Q86VQ1 547 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 KNL1Q8NG31 2342 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 DCTN6O00399 190 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 OR2C1O95371 312 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 SP6Q3SY56 376 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 THSD4Q6ZMP0 1018 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 TREM2Q9NZC2 230 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 PDGFAP04085 211 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 OR2B8PP59922 312 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 MOGAT3Q86VF5 341 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 SMIM7Q9BQ49 75 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 MS4A5Q9H3V2 200 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 C21orf58P58505 322 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 OR13D1Q8NGV5 346 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 ST8SIA2Q92186 375 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 GMPPAQ96IJ6 420 aaPredicted RBP17.87■□□□□ 0.45
CTDP1-208ENST00000613122 LSM2Q9Y333 95 aaKnown RBP17.87■□□□□ 0.45
CTDP1-208ENST00000613122 GP1BAP07359 652 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 LIFP15018 202 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 LRRC3BQ96PB8 259 aa17.87■□□□□ 0.45
CTDP1-208ENST00000613122 FAM157AC9JC47 383 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 PPP1R2P9O14990 202 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 CST7O76096 145 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 DUS4LO95620 317 aaKnown RBP17.86■□□□□ 0.45
CTDP1-208ENST00000613122 ZNF17P17021 662 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 BAP18Q8IXM2 172 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 OR8B12Q8NGG6 310 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 RXFP4Q8TDU9 374 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 C14orf79Q96F83 325 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 RNF7Q9UBF6 113 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 PNPP00491 289 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 A0A1W2PPC1 479 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 ASCL5Q7RTU5 278 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 ABHD3Q8WU67 409 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 GSX2Q9BZM3 304 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 OCEL1Q9H607 264 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 CLCF1Q9UBD9 225 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 A0A1B0GTH9 108 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 MASP2O00187 686 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 FUCA1P04066 466 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 C1orf185Q5T7R7 199 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms