RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 ZMAT3Q9HA38 289 aaKnown RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 A0A1B0GU03 582 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 OR2T8A6NH00 312 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 IGHEP01854 428 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 CLN3Q13286 438 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 BARX1Q9HBU1 254 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 FITM1A5D6W6 292 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 ARR3P36575 388 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 TAS1R1Q7RTX1 841 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 OR52N5Q8NH56 324 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 CGGBP1Q9UFW8 167 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 TCRBV5S1A1TA0A578 114 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 TMX2-CTNND1H3BSU7 103 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 GABRA6Q16445 453 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 ACSM5Q6NUN0 579 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 LDLRAD3Q86YD5 345 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 OR51H1Q8NH63 302 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 RHOVQ96L33 236 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 FBXO4Q9UKT5 387 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 IGHA2P01877 340 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 HBZP02008 142 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 DEFA4P12838 97 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 C10orf126Q8N4M7 172 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 GLIS2Q9BZE0 524 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 TECRQ9NZ01 308 aaKnown RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 VENTXO95231 258 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 ICAM2P13598 275 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 HIST1H1DP16402 221 aaKnown RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 DLK2Q6UY11 383 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 TM4SF18Q96CE8 201 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 WDR83Q9BRX9 315 aaKnown RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 LIPGQ9Y5X9 500 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 PRSS37A4D1T9 235 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 FUT6P51993 359 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 SMIM21Q3B7S5 101 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 CMTM8Q8IZV2 173 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 PEX11GQ96HA9 241 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 RARRES3Q9UL19 164 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 TMEM272A0A1B0GTI8 110 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 VDAC1P21796 283 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 AVPR2P30518 371 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 MDGA1Q8NFP4 955 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 ZBP1Q9H171 429 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.89□□□□□ -1.156e-7■■■□□ 17.6
TTC28-208ENST00000612946 SMPD2O60906 423 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 EPHA8P29322 1005 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 NNATQ16517 81 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 FAM219AQ8IW50 185 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 PUSL1Q8N0Z8 303 aaKnown RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 UBE2FQ969M7 185 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 OBP2BQ9NPH6 170 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 MTCH2Q9Y6C9 303 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 SUMO3P55854 103 aaPredicted RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 MRPL54Q6P161 138 aaKnown RBP7.89□□□□□ -1.15
TTC28-208ENST00000612946 OR8B4Q96RC9 309 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 LAT2Q9GZY6 243 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 GPR84Q9NQS5 396 aa7.89□□□□□ -1.15
TTC28-208ENST00000612946 B4E171 279 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 PPP6CO00743 305 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 F13BP05160 661 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 SP1P08047 785 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 POU3F2P20265 443 aaPredicted RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 CD1CP29017 333 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 CCR5P51681 352 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 LINC00596Q86U02 117 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MRPL24Q96A35 216 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 C2orf88Q9BSF0 95 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 QSER1Q2KHR3 1735 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 SERTM2A0A1B0GWG4 89 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MPDU1O75352 247 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 FGF18O76093 207 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 CXCL3P19876 107 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 PAQR6Q6TCH4 344 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 PERPQ96FX8 193 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 C19orf67A6NJJ6 358 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ADM5C9JUS6 153 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 UTS2O95399 124 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 HNRNPA1L2Q32P51 320 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 TXNDC8Q6A555 127 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MS4A7Q9GZW8 240 aaPredicted RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 DSPPQ9NZW4 1301 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ZFAND5O76080 213 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ANKRD55Q3KP44 614 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 SPNS3Q6ZMD2 512 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ZGRF1Q86YA3 2104 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 SLAMF6Q96DU3 332 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 HLA-DRB1P01911 266 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 TYMSP04818 313 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 FUT3P21217 361 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ZNF766Q5HY98 468 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 DMRTA1Q5VZB9 504 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 OR1L1Q8NH94 360 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms