RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SLC35F2Q8IXU6 374 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 ELMOD2Q8IZ81 293 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 DTX3Q8N9I9 347 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 OR14K1Q8NGZ2 314 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 PIFOQ8TCI5 191 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 CFHR4Q92496 578 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 APOL4Q9BPW4 351 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 CADM1Q9BY67 442 aaKnown RBP14.42□□□□□ -0.1
SSBP1-215ENST00000612337 OR52A1Q9UKL2 312 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.42□□□□□ -0.1
SSBP1-215ENST00000612337 FOXJ3Q9UPW0 622 aa14.42□□□□□ -0.1
SSBP1-215ENST00000612337 A0A1B0GTI1 187 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 CHST1O43916 411 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 BNIP1Q12981 228 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 ZNF273Q14593 569 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 NXNL2Q5VZ03 156 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 KLHDC1Q8N7A1 406 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 UTP4Q969X6 686 aaKnown RBP14.41□□□□□ -0.1
SSBP1-215ENST00000612337 NPFFR1Q9GZQ6 430 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 ADGRL4Q9HBW9 690 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 H2AFY2Q9P0M6 372 aaPredicted RBP14.41□□□□□ -0.1
SSBP1-215ENST00000612337 OR14J1Q9UGF5 321 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 MRM2Q9UI43 246 aaKnown RBP14.41□□□□□ -0.1
SSBP1-215ENST00000612337 SNX5Q9Y5X3 404 aa14.41□□□□□ -0.1
SSBP1-215ENST00000612337 MEGF11A6BM72 1044 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 FAM90A8PA6NJQ4 464 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 VGLL3A8MV65 326 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 MAGEB4O15481 346 aaPredicted RBP14.4□□□□□ -0.1
SSBP1-215ENST00000612337 OPN1MWP04001 364 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 OPN1MW2P0DN77 364 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 OPN1MW3P0DN78 364 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 DLX6P56179 175 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 ERVK11-1P61568 191 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 EFNB1P98172 346 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 AADACL4Q5VUY2 407 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 ZNF782Q6ZMW2 699 aaPredicted RBP14.4□□□□□ -0.1
SSBP1-215ENST00000612337 PLEKHG7Q6ZR37 379 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 TMEM163Q8TC26 289 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 PKIBQ9C010 78 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 CLN6Q9NWW5 311 aa14.4□□□□□ -0.1
SSBP1-215ENST00000612337 PLXNB1O43157 2135 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 A6NIN4 97 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 C17orf98A8MV24 154 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 ZNF670-ZNF695F2Z2N8 137 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 K7N7A8 449 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 M0R129 80 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 CCL1P22362 96 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 IL24Q13007 206 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 LHFPL4Q7Z7J7 247 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 ANGPTL5Q86XS5 388 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 BATF2Q8N1L9 274 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 TCEANCQ8N8B7 351 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 C11orf44Q8N8P7 122 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 CDCA4Q9BXL8 241 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 NOTCH3Q9UM47 2321 aa14.39□□□□□ -0.11
SSBP1-215ENST00000612337 ZAR1LA6NP61 321 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 G3V4G9 280 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 PIPP12273 146 aaPredicted RBP14.38□□□□□ -0.11
SSBP1-215ENST00000612337 EPHA2P29317 976 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 COL10A1Q03692 680 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 BEAN1Q3B7T3 259 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 SLX4IPQ5VYV7 408 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 HIST2H2BDQ6DRA6 164 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 KRT84Q9NSB2 600 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 SLC22A13Q9Y226 551 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 BOLA1Q9Y3E2 137 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 TBL2Q9Y4P3 447 aaKnown RBP14.38□□□□□ -0.11
SSBP1-215ENST00000612337 DSCAML1Q8TD84 2053 aa14.38□□□□□ -0.11
SSBP1-215ENST00000612337 ODF3BA8MYP8 253 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 MITFO75030 526 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-215ENST00000612337 ZNF737O75373 536 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 RBP4P02753 201 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 CHRM2P08172 466 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 ZNF728P0DKX0 622 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 VSIG10L2P0DP72 767 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 RASSF2P50749 326 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 SAMD5Q5TGI4 173 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 C12orf73Q69YU5 71 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 GID4Q8IVV7 300 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 DYNAPQ8N1N2 210 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 ASCC1Q8N9N2 400 aaKnown RBP14.37□□□□□ -0.11
SSBP1-215ENST00000612337 OR13D1Q8NGV5 346 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 TRMT10AQ8TBZ6 339 aaKnown RBP14.37□□□□□ -0.11
SSBP1-215ENST00000612337 FOXRED1Q96CU9 486 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-215ENST00000612337 MALSU1Q96EH3 234 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 NKX3-1Q99801 234 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-215ENST00000612337 ZNF702PQ9H963 129 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 SLC7A11Q9UPY5 501 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 TCF19Q9Y242 345 aa14.37□□□□□ -0.11
SSBP1-215ENST00000612337 FAM230AA0A1W2PPH8 454 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 ATP5HO75947 161 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 RPP14O95059 124 aaKnown RBP14.36□□□□□ -0.11
SSBP1-215ENST00000612337 ARG1P05089 322 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 KRT8P05787 483 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 PLA1AQ53H76 456 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 KPRPQ5T749 579 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-215ENST00000612337 ZNF626Q68DY1 528 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 KDM4DQ6B0I6 523 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 SSX6Q7RTT6 188 aa14.36□□□□□ -0.11
SSBP1-215ENST00000612337 CATSPERDQ86XM0 798 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms