RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 DTX3Q8N9I9 347 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 NDNFQ8TB73 568 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 PHF21AQ96BD5 680 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 OR8B4Q96RC9 309 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 CDCA4Q9BXL8 241 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 NECAP2Q9NVZ3 263 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 AURKAIP1Q9NWT8 199 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 TVP23BQ9NYZ1 205 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 HILPDAQ9Y5L2 63 aa10.79□□□□□ -0.68
HMGB1P24-201ENST00000611897 FAM230AA0A1W2PPH8 454 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 MEGF11A6BM72 1044 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ARRDC5A6NEK1 342 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 M0R129 80 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 MAGEB4O15481 346 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 TTRP02766 147 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 VDAC2P45880 294 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 COL10A1Q03692 680 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 EMX1Q04741 257 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 SLC34A1Q06495 639 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ODF4Q2M2E3 257 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 CLVS2Q5SYC1 327 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 GDPD3Q7L5L3 318 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ANGPTL5Q86XS5 388 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ADGRG5Q8IZF4 528 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ARHGAP24Q8N264 748 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 OR13D1Q8NGV5 346 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 NUFIP1Q9UHK0 495 aaKnown RBP10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 SLC22A13Q9Y226 551 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
HMGB1P24-201ENST00000611897 A6NDX4 124 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 CCDC182A6NF36 153 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 MPIG6BO95866 241 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF728P0DKX0 622 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 PF4V1P10720 104 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 CD33P20138 364 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 OR12D2P58182 307 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 CDK5Q00535 292 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 KHDC1LQ5JSQ8 128 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 DEGS2Q6QHC5 323 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 Q6ZS46 218 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 BCDIN3DQ7Z5W3 292 aaKnown RBP10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF679Q8IYX0 411 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 ASB9Q96DX5 294 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 CNN2Q99439 309 aaKnown RBP10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 APOL4Q9BPW4 351 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 PLEKHA1Q9HB21 404 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 PITPNC1Q9UKF7 332 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 TBL2Q9Y4P3 447 aaKnown RBP10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.69
HMGB1P24-201ENST00000611897 PQLC2LA1A4F0 135 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ACOD1A6NK06 481 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 VGLL3A8MV65 326 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF254O75437 659 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 RPP14O95059 124 aaKnown RBP10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 IGLL1P15814 213 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 SNU13P55769 128 aaKnown RBP10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 CXCR4P61073 352 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 GK3PQ14409 553 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF322Q6U7Q0 402 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 PIGWQ7Z7B1 504 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 SPATA24Q86W54 205 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 CALHM1Q8IU99 346 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF676Q8N7Q3 588 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ASB17Q8WXJ9 295 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 SLAMF9Q96A28 289 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 TBX5Q99593 518 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 SLC25A19Q9HC21 320 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
HMGB1P24-201ENST00000611897 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ODF3BA8MYP8 253 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 K7N7A8 449 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 IGLV3-1P01715 115 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 PF4P02776 101 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ALDOBP05062 364 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 IGHV1-8P0DP01 117 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ANXA8P13928 327 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 DLX6P56179 175 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ACTA2P62736 377 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 BLCAPP62952 87 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ACTG2P63267 376 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ACTC1P68032 377 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ACTA1P68133 377 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ROM1Q03395 351 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 ZNF626Q68DY1 528 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 CCDC121Q6ZUS5 278 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 TRAPPC6BQ86SZ2 158 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 SLC35F2Q8IXU6 374 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 Q8N2B8 174 aa10.75□□□□□ -0.69
HMGB1P24-201ENST00000611897 CAPSLQ8WWF8 208 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms