RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
IRF3-229ENST00000601373 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 A0A1W2PP11 408 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 LRP5LA4QPB2 252 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 VSTM5A8MXK1 200 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 H3BUI4 141 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 PLATP00750 562 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 IGHV3-13P01766 116 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 LPLP06858 475 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 SORDQ00796 357 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 IL24Q13007 206 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 RNASE12Q5GAN4 147 aaKnown RBP11.7□□□□□ -0.54
IRF3-229ENST00000601373 FAM76BQ5HYJ3 339 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 ELP2Q6IA86 826 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 Q6ZTK2 550 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 OR10K1Q8NGX5 313 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 GPX8Q8TED1 209 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 CA5BP1Q8WTZ4 195 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 ZC3HAV1LQ96H79 300 aaKnown RBP11.7□□□□□ -0.54
IRF3-229ENST00000601373 RADILQ96JH8 1075 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 Q96M66 194 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 WFIKKN1Q96NZ8 548 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 NICN1Q9BSH3 213 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 ADAT1Q9BUB4 502 aaKnown RBP11.7□□□□□ -0.54
IRF3-229ENST00000601373 FGF23Q9GZV9 251 aaPredicted RBP11.7□□□□□ -0.54
IRF3-229ENST00000601373 OR51I2Q9H344 312 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
IRF3-229ENST00000601373 CACNG2Q9Y698 323 aa11.7□□□□□ -0.54
IRF3-229ENST00000601373 A0A0A6YYD4 124 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 A0A1B0GVG6 124 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 A0A1B0GWJ7 208 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A10PA6NDY2 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A16PA6NEW6 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 DPRXA6NFQ7 191 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A20PA6NIJ5 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A7PA6NKC0 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A22PA8MWA6 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A12PA8MX19 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A5PA8MXJ8 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A23PA8MXZ1 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 J3QT63 122 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 SOCS1O15524 211 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 CA11O75493 328 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 CSF1P09603 554 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A15PP0C7V4 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A13PP0C7W8 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A14PP0C7W9 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 FAM90A24PP0C7X0 464 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 MPZP25189 248 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 BLVRBP30043 206 aaPredicted RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 RFX2P48378 723 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ACTBP60709 375 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ACTG1P63261 375 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 KLF9Q13886 244 aaPredicted RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 ALKBH6Q3KRA9 238 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 NRARPQ7Z6K4 114 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ENKURQ8TC29 256 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 DVL3Q92997 716 aaPredicted RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 SEH1LQ96EE3 360 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 CXXC4Q9H2H0 198 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 PLK3Q9H4B4 646 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 KLK11Q9UBX7 282 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
IRF3-229ENST00000601373 POLDIP2Q9Y2S7 368 aa11.69□□□□□ -0.54
IRF3-229ENST00000601373 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 FAM240BA0A1B0GVZ2 78 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 MEIOCA2RUB1 952 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 FOXI3A8MTJ6 420 aaPredicted RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 TPD52L2O43399 206 aaKnown RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 ACAA1P09110 424 aaPredicted RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 PTHLHP12272 177 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 AGAP20933 346 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 FAUP35544 74 aaKnown RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 TMEM50BP56557 158 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 NHLRC3Q5JS37 347 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 HAGHLQ6PII5 290 aaPredicted RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 DUSP18Q8NEJ0 188 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 PRR7Q8TB68 274 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 TMEM171Q8WVE6 324 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 GCDHQ92947 438 aaPredicted RBP11.68□□□□□ -0.54
IRF3-229ENST00000601373 ZNF442Q9H7R0 627 aa11.68□□□□□ -0.54
IRF3-229ENST00000601373 DUSP13Q9UII6 198 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms