RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 AQP3Q92482 292 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
VRK3-207ENST00000594092 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 NAP1L6A6NFF2 107 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 CSTBP04080 98 aaKnown RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 KLF3P57682 345 aaPredicted RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 ACTBP60709 375 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ACTG1P63261 375 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 PCGF3Q3KNV8 242 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 WDR86Q86TI4 376 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 CADM3Q8N126 398 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ZNF843Q8N446 348 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ZNF808Q8N4W9 903 aaPredicted RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 DEDD2Q8WXF8 326 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 SEH1LQ96EE3 360 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 SELENOIQ9C0D9 397 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 OR51I2Q9H344 312 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ESRP2Q9H6T0 727 aaKnown RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 ZMAT3Q9HA38 289 aaKnown RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 MSL2Q9HCI7 577 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 CA10Q9NS85 328 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
VRK3-207ENST00000594092 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
VRK3-207ENST00000594092 A0A1B0GWJ7 208 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 WIPF3A6NGB9 483 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 HTR3BO95264 441 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 CLDN14O95500 239 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 MT-ND4P03905 459 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 CPT2P23786 658 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 BTCP35070 178 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 FAUP35544 74 aaKnown RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 CDNFQ49AH0 187 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 FAM76BQ5HYJ3 339 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 SAXO1Q8IYX7 474 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 OR10AD1Q8NGE0 317 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 RAB3CQ96E17 227 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 PLPPR2Q96GM1 343 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 TM2D1Q9BX74 207 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 MRPL37Q9BZE1 423 aaKnown RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 HRASLSQ9HDD0 168 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 COPZ2Q9P299 210 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 ATP23Q9Y6H3 246 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 MEIS3P1A6NDR6 274 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 TUBAL3A6NHL2 446 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 SOCS1O15524 211 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 C1QL1O75973 258 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 SFTPBP07988 381 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 MELTFP08582 738 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 GNB3P16520 340 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 PLA1AQ53H76 456 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 OLFML2AQ68BL7 652 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 ADAM5Q6NVV9 412 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 TMEM200AQ86VY9 491 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 FAM89BQ8N5H3 189 aa12.92□□□□□ -0.34
VRK3-207ENST00000594092 MRPL24Q96A35 216 aaKnown RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
VRK3-207ENST00000594092 HCFC1P51610 2035 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 LRP5LA4QPB2 252 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 SYNGR1O43759 233 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 GSTP1P09211 210 aaKnown RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 GTF2F2P13984 249 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 MPZP25189 248 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 GIFP27352 417 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 NPBWR2P48146 333 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 SLAMF9Q96A28 289 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 CREB3L1Q96BA8 519 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 UPRTQ96BW1 309 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 Q96M66 194 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 PKIBQ9C010 78 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 CXXC4Q9H2H0 198 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 ZNF442Q9H7R0 627 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 MTCH1Q9NZJ7 389 aa12.91□□□□□ -0.34
VRK3-207ENST00000594092 SPTBN1Q01082 2364 aaKnown RBP12.91□□□□□ -0.34
VRK3-207ENST00000594092 TMEM210A6NLX4 147 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 SHISA9B4DS77 424 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 F5H5P2 479 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 J3QT63 122 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 CYB5AP00167 134 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 BCL3P20749 454 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 TMEM50BP56557 158 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 SELENOVP59797 346 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 IL24Q13007 206 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ZNF154Q13106 437 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 BATF2Q8N1L9 274 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms