RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CELF2-AS1Q8N7Q2 184 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 Q8NFD4 153 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR4M1Q8NGD0 313 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR4D6Q8NGJ1 314 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR13G1Q8NGZ3 307 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR8S1Q8NH09 359 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR5P3Q8WZ94 311 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 PIGCQ92535 297 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 CMBLQ96DG6 245 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 SOX7Q9BT81 388 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 TM2D1Q9BX74 207 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 TMEM59Q9BXS4 323 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 OR2J1Q9GZK6 312 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 CA10Q9NS85 328 aa10.77□□□□□ -0.69
VMP1-202ENST00000585847 CISD1Q9NZ45 108 aaKnown RBP10.77□□□□□ -0.69
VMP1-202ENST00000585847 PURGQ9UJV8 347 aaKnown RBP10.77□□□□□ -0.69
VMP1-202ENST00000585847 CHD3Q12873 2000 aaKnown RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 IGLV3-9A0A075B6K5 115 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 TMEM272A0A1B0GTI8 110 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 PLSCR5A0PG75 271 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 POM121CA8CG34 1229 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 H3BSH0 61 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 GABARAPH6UMI1 98 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 CD8AP01732 235 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 CSTBP04080 98 aaKnown RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 GSTP1P09211 210 aaKnown RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 GSTT2BP0CG30 244 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 MPV17P39210 176 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 PMELP40967 661 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 KLF3P57682 345 aaPredicted RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 ACTBP60709 375 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ACTG1P63261 375 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 QRFPP83859 136 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 IL24Q13007 206 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 PDZK1IP1Q13113 114 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 RSU1Q15404 277 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ZNF79Q15937 498 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 FAM76BQ5HYJ3 339 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ELP2Q6IA86 826 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 C11orf71Q6IPW1 123 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 MOB3CQ70IA8 216 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 CMTM4Q8IZR5 234 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ZNF611Q8N823 705 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 C19orf18Q8NEA5 215 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 OR5H6Q8NGV6 325 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 RFT1Q96AA3 541 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 DHRS9Q9BPW9 319 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 ADAT1Q9BUB4 502 aaKnown RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 SPACA1Q9HBV2 294 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.76□□□□□ -0.69
VMP1-202ENST00000585847 TMEM100Q9NV29 134 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 MYEF2Q9P2K5 600 aaKnown RBP10.76□□□□□ -0.69
VMP1-202ENST00000585847 PLEKHA6Q9Y2H5 1048 aa10.76□□□□□ -0.69
VMP1-202ENST00000585847 AKAP6Q13023 2319 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 CENPXA8MT69 81 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 SERPINE3A8MV23 424 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 J3QRK9 145 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 J3QT63 122 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 TIMM8AO60220 97 aaPredicted RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 CDC14BO60729 498 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 SOD3P08294 240 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 VSIG8P0DPA2 414 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 IL7P13232 177 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 CLDN12P56749 244 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 RPS27AP62979 156 aaKnown RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 PSG7Q13046 419 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 ASAH1Q13510 395 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 HLXQ14774 488 aaPredicted RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 PNLIPRP3Q17RR3 467 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 SWI5Q1ZZU3 235 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 ALKBH6Q3KRA9 238 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 SPATA46Q5T0L3 261 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 DNM1P46Q6ZS02 220 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 DTX2Q86UW9 622 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 FBXW5Q969U6 566 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 MRPL24Q96A35 216 aaKnown RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 C1orf147Q96MC9 270 aaPredicted RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 MRPL37Q9BZE1 423 aaKnown RBP10.75□□□□□ -0.69
VMP1-202ENST00000585847 ATG5Q9H1Y0 275 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 UBTD1Q9HAC8 227 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 POU2F3Q9UKI9 436 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 ZDHHC8Q9ULC8 765 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 FZR1Q9UM11 496 aa10.75□□□□□ -0.69
VMP1-202ENST00000585847 FAM230AA0A1W2PPH8 454 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 PTBP3O95758 552 aaKnown RBP10.74□□□□□ -0.69
VMP1-202ENST00000585847 GLAP06280 429 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 ADH4P08319 380 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 OR4A8P0C604 315 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 TBPP20226 339 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 TNFSF4P23510 183 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 CDK2P24941 298 aa10.74□□□□□ -0.69
VMP1-202ENST00000585847 APOBEC3AP31941 199 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms