RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 PKIBQ9C010 78 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 Q9H521 79 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 SIRT7Q9NRC8 400 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 POMT1Q9Y6A1 747 aa10.19□□□□□ -0.78
SS18-225ENST00000585121 LOC107986453A0A1B0GWG9 222 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 H0YAE9 185 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 SLC16A6O15403 523 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 DENRO43583 198 aaKnown RBP10.18□□□□□ -0.78
SS18-225ENST00000585121 TFF1P04155 84 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 MELTFP08582 738 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 HTR1AP08908 422 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 ACTA2P62736 377 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 ACTG2P63267 376 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 NCR3LG1Q68D85 454 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 METAP1DQ6UB28 335 aaPredicted RBP10.18□□□□□ -0.78
SS18-225ENST00000585121 FAM185AQ8N0U4 392 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 PRSS35Q8N3Z0 413 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 OR5D13Q8NGL4 314 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 PP6455Q8WZ26 134 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 BORCS8Q96FH0 119 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 ZNF747Q9BV97 191 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 DPAGT1Q9H3H5 408 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 METTL8Q9H825 291 aaKnown RBP10.18□□□□□ -0.78
SS18-225ENST00000585121 OR14J1Q9UGF5 321 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 ZNF222Q9UK12 451 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 MAB21L2Q9Y586 359 aa10.18□□□□□ -0.78
SS18-225ENST00000585121 A0A1B0GUS0 222 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 hCG_1809904A0A1W2PP81 198 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PPE2 198 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PR64 198 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PRV1 198 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 BTBD17A6NE02 478 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 J3QLW9 94 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 CYB5AP00167 134 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 PAHP00439 452 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 FBP1P09467 338 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 OCM2P0CE71 109 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 OCMP0CE72 109 aaPredicted RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 ZNF19P17023 458 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ZNF20P17024 532 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 MPZP25189 248 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ISL1P61371 349 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 IL24Q13007 206 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 FIP1L1Q6UN15 594 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ANGPTL5Q86XS5 388 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 OR2G2Q8NGZ5 317 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 MBOAT4Q96T53 435 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 NRIP2Q9BQI9 281 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 CHST5Q9GZS9 411 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 EXOGQ9Y2C4 368 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 A0A0U1RQK1 487 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 LOC100130705A0A1B0GUX0 176 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 FAM181BA6NEQ2 426 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 FADS2O95864 444 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 KNG1P01042 644 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 RPSAP08865 295 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 KIR3DL2P43630 455 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 RBP2P50120 134 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 UBE2E1P51965 193 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ATP1B3P54709 279 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 OR12D2P58182 307 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 RPL31P62899 125 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 MED21Q13503 144 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 UBE2V2Q15819 145 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 RDH10Q8IZV5 341 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 CD177Q8N6Q3 437 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 Q8N7P7 452 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ZNF555Q8NEP9 628 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 LGALS12Q96DT0 336 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 CEP19Q96LK0 163 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 CHIAQ9BZP6 476 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 ELL3Q9HB65 397 aaPredicted RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 NEK6Q9HC98 313 aa10.17□□□□□ -0.78
SS18-225ENST00000585121 SMPD3Q9NY59 655 aaPredicted RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 SF3B6Q9Y3B4 125 aaKnown RBP10.17□□□□□ -0.78
SS18-225ENST00000585121 E9PQ18 207 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 J3QRE1 110 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 NPFFO15130 113 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 CHRM2P08172 466 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 PRKACBP22694 351 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 CCR9P51686 369 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 RPL15P61313 204 aaKnown RBP10.16□□□□□ -0.78
SS18-225ENST00000585121 FDX2Q6P4F2 183 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 LDLRAD3Q86YD5 345 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 EGFL6Q8IUX8 553 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 MKXQ8IYA7 352 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 Q8IYB0 196 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 ENTHD1Q8IYW4 607 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 BATF2Q8N1L9 274 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 ZNF676Q8N7Q3 588 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 DNAAF1Q8NEP3 725 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 OR4F5Q8NH21 305 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 RHOXF1Q8NHV9 184 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 DYRK2Q92630 601 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 TFAP2CQ92754 450 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms