RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 OR5AS1Q8N127 324 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 GABRG1Q8N1C3 465 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 OR4D6Q8NGJ1 314 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 NPRL2Q8WTW4 380 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 PIGCQ92535 297 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
SS18-207ENST00000577636 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
SS18-207ENST00000577636 TUBG2Q9NRH3 451 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FBLN5Q9UBX5 448 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 LPAR3Q9UBY5 353 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 POU2F3Q9UKI9 436 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
SS18-207ENST00000577636 FAM230AA0A1W2PPH8 454 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 C5orf63A6NC05 138 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 NAP1L6A6NFF2 107 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 GMDSO60547 372 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 ZNF780AO75290 641 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 RBBP9O75884 186 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CYB5AP00167 134 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CSTBP04080 98 aaKnown RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 CSF1P09603 554 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CD3GP09693 182 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 TMEM225BP0DP42 221 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CCL2P13500 99 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 ZNF16P17020 682 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 PTGFRP43088 359 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 RAD52P43351 418 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 IDH3GP51553 393 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 ACTBP60709 375 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 ACTG1P63261 375 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 ARL6IP1Q15041 203 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 UBE2V2Q15819 145 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CCBE1Q6UXH8 406 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 MOB3CQ70IA8 216 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 ZNF525Q8N782 197 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 CHST4Q8NCG5 386 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 OR56B1Q8NGI3 324 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 DEDD2Q8WXF8 326 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 MUCL1Q96DR8 90 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 C11orf54Q9H0W9 315 aaPredicted RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 METTL9Q9H1A3 318 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 NOX3Q9HBY0 568 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 RBFOX1Q9NWB1 397 aaKnown RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
SS18-207ENST00000577636 CACNG2Q9Y698 323 aa8.68□□□□□ -1.02
SS18-207ENST00000577636 IGKV1-9A0A0C4DH69 117 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ZNF503-AS2A6NEH8 195 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 OR5H1A6NKK0 313 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 SULT1C2O00338 296 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ABCD4O14678 606 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 MPIG6BO95866 241 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
SS18-207ENST00000577636 ACKR3P25106 362 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 OR3A4PP47883 348 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 EFNB2P52799 333 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 DSCR9P59020 149 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 DGCR2P98153 550 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
SS18-207ENST00000577636 DYRK1AQ13627 763 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 PPA1Q15181 289 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 RSU1Q15404 277 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 RSBN1Q5VWQ0 802 aaPredicted RBP8.67□□□□□ -1.02
SS18-207ENST00000577636 TMEM42Q69YG0 159 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 SSX8Q7RTT4 187 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 DTX2Q86UW9 622 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ZNF584Q8IVC4 421 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 FAM169BQ8N8A8 192 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 FAM168AQ92567 244 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 YIPF5Q969M3 257 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 SPACA5Q96QH8 159 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 GAL3ST1Q99999 423 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
SS18-207ENST00000577636 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 COPZ2Q9P299 210 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 MYEF2Q9P2K5 600 aaKnown RBP8.67□□□□□ -1.02
SS18-207ENST00000577636 STARD10Q9Y365 291 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms