RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 HOXD3P31249 432 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 MAGEA2P43356 314 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ARHGDIBP52566 201 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 EDDM3BP56851 147 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ACTA2P62736 377 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ACTG2P63267 376 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ACTC1P68032 377 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ACTA1P68133 377 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 PPP1R8Q12972 351 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 SPATS1Q496A3 300 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 LDLRAD2Q5SZI1 272 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 PLBD1Q6P4A8 553 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 DEGS2Q6QHC5 323 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZBTB49Q6ZSB9 765 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 IQCF1Q8N6M8 205 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR51E1Q8TCB6 317 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 MYDGFQ969H8 173 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 MYLK2Q9H1R3 596 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 LIN7BQ9HAP6 207 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 GPR84Q9NQS5 396 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 INPP5EQ9NRR6 644 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 FAM206AQ9NX38 181 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLC22A13Q9Y226 551 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 KLHDC2Q9Y2U9 406 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 DHRS3O75911 302 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 ALOX5APP20292 161 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 RPS7P62081 194 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 COL10A1Q03692 680 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLC35D3Q5M8T2 416 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 CLVS2Q5SYC1 327 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 CD300LDQ6UXZ3 194 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 CDRT15Q96T59 188 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 MROQ9BYG7 248 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 PBOV1Q9GZY1 135 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 TAS2R1Q9NYW7 299 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZMAT5Q9UDW3 170 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 DSCAML1Q8TD84 2053 aa9.32□□□□□ -0.92
CTDNEP1-212ENST00000576613 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 PQLC2LA1A4F0 135 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 MEX3AA1L020 520 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 DLGAP1O14490 977 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF254O75437 659 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 LPLP06858 475 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 CHRM2P08172 466 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 JUNBP17275 347 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 MPZP25189 248 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 HTR1DP28221 377 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 BRS3P32247 399 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 ESRRGP62508 458 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF829Q3KNS6 432 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR2T5Q6IEZ7 315 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 CYP2R1Q6VVX0 501 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 ASRGL1Q7L266 308 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR8H2Q8N162 312 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 BATF2Q8N1L9 274 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR10G2Q8NGC3 310 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR51D1Q8NGF3 324 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR2T29Q8NH02 315 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 TEAD3Q99594 435 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 NIPSNAP1Q9BPW8 284 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 MCRIP2Q9BUT9 160 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 CHID1Q9BWS9 393 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 YIPF3Q9GZM5 350 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 MAGIXQ9H6Y5 334 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 NDE1Q9NXR1 346 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 NUFIP1Q9UHK0 495 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 SESN1Q9Y6P5 492 aa9.31□□□□□ -0.92
CTDNEP1-212ENST00000576613 PSMD9O00233 223 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF737O75373 536 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 HMGN1P05114 100 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 CBX1P83916 185 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 IL24Q13007 206 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 GK3PQ14409 553 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 EDDM3AQ14507 147 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 ABCA11PQ4W5N1 156 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 C16orf89Q6UX73 402 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 CPOQ8IVL8 374 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 STMN2Q93045 179 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 FEVQ99581 238 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 PKIBQ9C010 78 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 TMEM133Q9H2Q1 129 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 MOB1AQ9H8S9 216 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 GPR173Q9NS66 373 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 VNN3Q9NY84 501 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 ACTR3BQ9P1U1 418 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 DNAJB9Q9UBS3 223 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 LINC00312Q9Y6C7 94 aa9.3□□□□□ -0.92
CTDNEP1-212ENST00000576613 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ATP6V1B2P21281 511 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms