RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	USE1	Q9NZ43	259 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	GNG8	Q9UK08	70 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC7A11	Q9UPY5	501 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	POLDIP2	Q9Y2S7	368 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM96B	Q9Y3D0	163 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	PCDHGB1	Q9Y5G3	927 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635	POMT1	Q9Y6A1	747 aa		5.69	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A0U1RQK1	487 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SMIM31	A0A1B0GVY4	71 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM230A	A0A1W2PPH8	454 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PQ09	198 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	DAPL1	A0PJW8	107 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM181B	A6NEQ2	426 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ANKRD61	A6NGH8	418 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SNTN	A6NMZ2	147 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635		E9PQ18	207 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635		J3QT63	122 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635		M0R1W7	72 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC1A7	O00341	560 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	EI24	O14681	340 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SYT7	O43581	403 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SYNGR1	O43759	233 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ENTPD6	O75354	484 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	NXPH2	O95156	264 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SERPINA3	P01011	423 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.68	□□□□□ -1.5	1e-9	■■□□□ 12.3
SF3B3-209	ENST00000567635	MELTF	P08582	738 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	PGA5	P0DJD9	388 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	OMG	P23515	440 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	EEF1B2	P24534	225 aa	Known RBP	5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	MPZ	P25189	248 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	IER3	P46695	156 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ALDH3A2	P51648	485 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CAPZA1	P52907	286 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	AQP4	P55087	323 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF85	Q03923	595 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	IL24	Q13007	206 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	UBE2V2	Q15819	145 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CNPY1	Q3B7I2	92 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	TP53I3	Q53FA7	332 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	FIP1L1	Q6UN15	594 aa	Known RBP	5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM220A	Q7Z4H9	259 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ANGPTL5	Q86XS5	388 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CBR4	Q8N4T8	237 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF561	Q8N587	486 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CD177	Q8N6Q3	437 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMEM185A	Q8NFB2	350 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	C10orf35	Q96D05	121 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF488	Q96MN9	340 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ARPC5L	Q9BPX5	153 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	NRIP2	Q9BQI9	281 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CHIA	Q9BZP6	476 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635		Q9H521	79 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	METTL8	Q9H825	291 aa	Known RBP	5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	UNKL	Q9H9P5	680 aa	Known RBP	5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	PLEKHA1	Q9HB21	404 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	SIRT7	Q9NRC8	400 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF222	Q9UK12	451 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	CAB39	Q9Y376	341 aa	Predicted RBP	5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	MAB21L2	Q9Y586	359 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	MMP24	Q9Y5R2	645 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	PKD1L1	Q8TDX9	2849 aa		5.68	□□□□□ -1.5
SF3B3-209	ENST00000567635	TRBV23-1	A0A0A0MS06	115 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1B0GUS0	222 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PRD5	423 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PRF3	423 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PRM7	423 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		H0YAE9	185 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	RNASEK-C17orf49	H0YIS7	233 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		H3BSH0	61 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635		J3QRE1	110 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	NPFF	O15130	113 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	GATB	O75879	557 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	FBP1	P09467	338 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	UBC	P0CG48	685 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	KIR3DL2	P43630	455 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	UBE2E1	P51965	193 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	FUT6	P51993	359 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	RPL15	P61313	204 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ISL1	P61371	349 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ERVK11-1	P61568	191 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACTC1	P68032	377 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACTA1	P68133	377 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	MED21	Q13503	144 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMEM244	Q5VVB8	128 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	NCR3LG1	Q68D85	454 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMEM200B	Q69YZ2	307 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	FDX2	Q6P4F2	183 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	LDLRAD3	Q86YD5	345 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	CALHM1	Q8IU99	346 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	RDH10	Q8IZV5	341 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM185A	Q8N0U4	392 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	PRSS35	Q8N3Z0	413 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACBD7	Q8N6N7	88 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR5D13	Q8NGL4	314 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR2G2	Q8NGZ5	317 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR4F5	Q8NH21	305 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	PP6455	Q8WZ26	134 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms