RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CRMP1Q14194 572 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ELAVL3Q14576 367 aaKnown RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 GNMTQ14749 295 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 UBE2V2Q15819 145 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SLC39A5Q6ZMH5 540 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 RHBDD1Q8TEB9 315 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TRIB1Q96RU8 372 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PLEKHJ1Q9NW61 149 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SELENOKQ9Y6D0 94 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 MYO7AQ13402 2215 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ZSWIM8A7E2V4 1837 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 A0A087WV48 116 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 OR5H15A6NDH6 313 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 OR5H14A6NHG9 310 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 OR5H1A6NKK0 313 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ZNF264O43296 627 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 NDUFB8O95169 186 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 HLA-DOBP13765 273 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PNLIPP16233 465 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SLC24A5Q71RS6 500 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ZNF676Q8N7Q3 588 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ARL14EPQ8N8R7 260 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 AGBL5Q8NDL9 886 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 Q8NFD4 153 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 FIBINQ8TAL6 211 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SLC25A43Q8WUT9 341 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 UHRF2Q96PU4 802 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PLEKHA3Q9HB20 300 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 OR6C3Q9NZP0 311 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 COL4A4P53420 1690 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 GREB1Q4ZG55 1949 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 MEGF11A6BM72 1044 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TGFAP01135 160 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 GALTP07902 379 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TBPP20226 339 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SERPINA2P20848 420 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 NPY1RP25929 384 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 CFPP27918 469 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ACVR1BP36896 505 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PSMB2P49721 201 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 HIST1H3AP68431 136 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 H3F3AP84243 136 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SLBPQ14493 270 aaKnown RBP eCLIP2.6□□□□□ -1.99
CHD9-218ENST00000566029 ABHD17CQ6PCB6 329 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TMEM64Q6YI46 380 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TMEM183AQ8IXX5 376 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 FAM213BQ8TBF2 198 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 DVL3Q92997 716 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 PCED1BQ96HM7 432 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 MED20Q9H944 212 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TAAR2Q9P1P5 351 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 KCNK6Q9Y257 313 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 GON4LQ3T8J9 2241 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 SLC17A2O00624 439 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TBX6O95947 436 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 AMY2AP04746 511 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 TMEM225BP0DP42 221 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PSMB6P28072 239 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 PPP1CCP36873 323 aaKnown RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 POU3F1Q03052 451 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 ZNF343Q6P1L6 599 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 COMMD6Q7Z4G1 85 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 MYPOPQ86VE0 399 aaPredicted RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 C20orf196Q8IYI0 205 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 ARRDC3Q96B67 414 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 MSI2Q96DH6 328 aaKnown RBP2.6□□□□□ -1.99
CHD9-218ENST00000566029 LOXL4Q96JB6 756 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 DMRT3Q9NQL9 472 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 CSAG2Q9Y5P2 127 aa2.6□□□□□ -1.99
CHD9-218ENST00000566029 KIR2DL5BA0A0G2JN68 375 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 KIR2DL5BA0A0G2JPC4 375 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 PDE6DO43924 150 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 RENP00797 406 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 KNG1P01042 644 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 LIPFP07098 398 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 FAM219AQ8IW50 185 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 KIR2DL5AQ8N109 375 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 C1QTNF2Q9BXJ5 285 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 OR2J1Q9GZK6 312 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 SLC17A5Q9NRA2 495 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 M0QYG6 137 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 ADCYAP1R1P41586 468 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 GPR12P47775 334 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 BTG2P78543 158 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 COL10A1Q03692 680 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 EDDM3AQ14507 147 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 SLC10A1Q14973 349 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 C12orf54Q6X4T0 127 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 HSD17B11Q8NBQ5 300 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 OR4S1Q8NGB4 309 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 OR10G4Q8NGN3 311 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 ZNRF4Q8WWF5 429 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 SS18L2Q9UHA2 77 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 TSPAN11A1L157 253 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 TMEM238C9JI98 176 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 VAMP5O95183 116 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 HTR2CP28335 458 aa2.59□□□□□ -1.99
CHD9-218ENST00000566029 PLAURQ03405 335 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms