RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MS4A7Q9GZW8 240 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 LPAR2Q9HBW0 351 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 EMC7Q9NPA0 242 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ZNF443Q9Y2A4 671 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 EML6Q6ZMW3 1958 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 LOC102723996A0A087X1L8 192 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HPP00738 406 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MT-ND4LP03901 98 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MC5RP33032 325 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PSMB3P49720 205 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 RBP2P50120 134 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PAFAH1B2P68402 229 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SLC35A2P78381 396 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 RIPPLY2Q5TAB7 128 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 IL34Q6ZMJ4 242 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ACKR4Q9NPB9 350 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PILRAQ9UKJ1 303 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 A0A1W2PQL4 384 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 WNT9BO14905 357 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A17O43808 307 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 COX5AP20674 150 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HOXA6P31267 233 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 DSCR4P56555 118 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 SELENOTP62341 195 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 TMEM52BQ4KMG9 183 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 AKR1C8PQ5T2L2 129 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 FAM58AQ8N1B3 248 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PARP16Q8N5Y8 322 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 NUDT10Q8NFP7 164 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR14L1PQ8NHC6 308 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 RAB24Q969Q5 203 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 BPIFA2Q96DR5 249 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 NUDT11Q96G61 164 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ST6GAL2Q96JF0 529 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OVOL2Q9BRP0 275 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 IER3IP1Q9Y5U9 82 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 CCDC187A0A096LP49 1063 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 EIF3GO75821 320 aaKnown RBP eCLIP2.98□□□□□ -1.93
CHD9-213ENST00000564845 STK17BO94768 372 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PTBP3O95758 552 aaKnown RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR8U9P0C7N5 309 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ZNF44P15621 663 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 EPHA8P29322 1005 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 OTX2P32243 289 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HTD2P86397 168 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HSF1Q00613 529 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ZNF85Q03923 595 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 BAMBIQ13145 260 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ZNF273Q14593 569 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR52L2PQ8NGH6 319 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR8U1Q8NH10 309 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 C11orf40Q8WZ69 217 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ZNF75AQ96N20 296 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 RAB40CQ96S21 281 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 GABARAPL1Q9H0R8 117 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR52D1Q9H346 318 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MRPS28Q9Y2Q9 187 aaKnown RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 MPC1Q9Y5U8 109 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ARL2-SNX15V9GYD0 113 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 TRDV1A0A1B0GX56 115 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 A0A1W2PPC4 97 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 H3BMH7 237 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 GIPP09681 153 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 CRISP2P16562 243 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 FGF9P31371 208 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 LGALS4P56470 323 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 TPPP2P59282 170 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SPEM2Q0P670 501 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MFAP5Q13361 173 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HLA-BQ31612 363 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 FAHD1Q6P587 224 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 HAGHLQ6PII5 290 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 TMEM200AQ86VY9 491 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 CA13Q8N1Q1 262 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SPICQ8N5J4 248 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR4D6Q8NGJ1 314 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SENP5Q96HI0 755 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 RCC1LQ96I51 464 aaKnown RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 TAAR9Q96RI9 348 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 LRFN3Q9BTN0 628 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 AUNIPQ9H7T9 357 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 NSG2Q9Y328 171 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 TIMM10BQ9Y5J6 103 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 KIF26BQ2KJY2 2108 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 ANGPTL7O43827 346 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 FADS1O60427 444 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PIAS2O75928 621 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MMP7P09237 267 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 AREGP15514 252 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 MPLP40238 635 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 CCR6P51684 374 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SSPNQ14714 243 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 SYT14P1Q58G82 188 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PLAG1Q6DJT9 500 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 NAXDQ8IW45 347 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 OR13C9Q8NGT0 318 aa2.98□□□□□ -1.93
CHD9-213ENST00000564845 PTPMT1Q8WUK0 201 aaPredicted RBP2.98□□□□□ -1.93
CHD9-213ENST00000564845 PTP4A1Q93096 173 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms