RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 M0QZK8 103 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 GGCTO75223 188 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 NSA2O95478 260 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF573Q86YE8 665 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 TSLPQ969D9 159 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 OR10A5Q9H207 317 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 TMEM150CB9EJG8 249 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 LMO7DNF2Z398 122 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 IGFBP3P17936 291 aaPredicted RBP12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 GPR3P46089 330 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 P2RY1P47900 373 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 CFHR1Q03591 330 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 ULK3Q6PHR2 472 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 LINC00114Q6XXX2 140 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 FOXN4Q96NZ1 517 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 PRDM6Q9NQX0 595 aa12.33□□□□□ -0.43
GTF3C1-203ENST00000562609 TMEM210A6NLX4 147 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 CST2P09228 141 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 CCR4P51679 360 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 NXPH1P58417 271 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 C1orf189Q5VU69 101 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 ABLIM2Q6H8Q1 611 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 SHISA6Q6ZSJ9 500 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 PRR22Q8IZ63 422 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 FAM185AQ8N0U4 392 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 TAAR8Q969N4 342 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 PTX4Q96A99 478 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 OR8D2Q9GZM6 311 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 LANCL2Q9NS86 450 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 TMEM14AQ9Y6G1 99 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 A6NIZ1 184 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 XKRYO14609 159 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 PIAS2O75928 621 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 KNG1P01042 644 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 FPR2P25090 351 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 CTXN1P60606 82 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 RAP1BP61224 184 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 UNC119Q13432 240 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC17A1Q14916 467 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 ETFRF1Q6IPR1 90 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC25A45Q8N413 288 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 C10orf53Q8N6V4 93 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 ZNF248Q8NDW4 579 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 OR51B6Q9H340 312 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 LPAR2Q9HBW0 351 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 FSCN3Q9NQT6 498 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 B9D1Q9UPM9 204 aa12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-203ENST00000562609 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 K7N7A8 449 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 SIAH2O43255 324 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 HSPA12AO43301 675 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 EFNA3P52797 238 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 COL10A1Q03692 680 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 BCORP1Q8N888 145 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 MEGF11A6BM72 1044 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 LILRA5A6NI73 299 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 CHRM2P08172 466 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 FGF5P12034 268 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 IRF2P14316 349 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 FOSL2P15408 326 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 ARL4DP49703 201 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 RBX1P62877 108 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 ZNF880Q6PDB4 577 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 GALNTL5Q7Z4T8 443 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 SGPP2Q8IWX5 399 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 C5orf34Q96MH7 638 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 KLHDC3Q9BQ90 382 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 CNTD2Q9H8S5 307 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 RFNGQ9Y644 331 aa12.32□□□□□ -0.44
GTF3C1-203ENST00000562609 CEACAM18A8MTB9 384 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CDC14BO60729 498 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 FOLR1P15328 257 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 SELEP16581 610 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 MMP16P51512 607 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 POLR2HP52434 150 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 C1orf100Q5SVJ3 147 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms