RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CD300AQ9UGN4 299 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 MAGEL2Q9UJ55 1249 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 LINC00527Q9UJ94 153 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 A0A1W2PPH5 198 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 C17orf98A8MV24 154 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 APOC1P02654 83 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 PGA5P0DJD9 388 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF728P0DKX0 622 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 DUSP1P28562 367 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 MAP2K3P46734 347 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 UTF1Q5T230 341 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 PRAMEF5Q5TYX0 476 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 SHFQ7M4L6 423 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 TRPM8Q7Z2W7 1104 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 CALHM1Q8IU99 346 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 TEX47Q8TBZ9 253 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 FOXRED1Q96CU9 486 aaPredicted RBP9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 MALSU1Q96EH3 234 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 RCC1LQ96I51 464 aaKnown RBP9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 PRR25Q96S07 402 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 PBOV1Q9GZY1 135 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 RGCCQ9H4X1 137 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 ING3Q9NXR8 418 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 PITPNC1Q9UKF7 332 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 SLC22A13Q9Y226 551 aa9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 TBL2Q9Y4P3 447 aaKnown RBP9.32□□□□□ -0.92
NSMCE1-202ENST00000561960 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 TMEM269A0A1B0GVZ9 245 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 hCG_1809904A0A1W2PP81 198 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 A0A1W2PPE2 198 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 FAM230AA0A1W2PPH8 454 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 A0A1W2PR64 198 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 A0A1W2PRV1 198 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 E9PQ18 207 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 J3QT63 122 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 M0R129 80 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 GSC2O15499 205 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 CCDC22O60826 627 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 NRASP01111 189 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 IGHA1P01876 353 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 SNRNP70P08621 437 aaKnown RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 PAICSP22234 425 aaKnown RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF684Q5T5D7 378 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 TMEM236Q5W0B7 351 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 LCN8Q6JVE9 175 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 GDPD3Q7L5L3 318 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 CPOQ8IVL8 374 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 OR5A2Q8NGI9 324 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 RBMXL1Q96E39 390 aaKnown RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 NOL4LQ96MY1 436 aaPredicted RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 ELAC2Q9BQ52 826 aaKnown RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 SLC25A33Q9BSK2 321 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 ABCB9Q9NP78 766 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 LAMP5Q9UJQ1 280 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 COPS3Q9UNS2 423 aa9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 SAMHD1Q9Y3Z3 626 aaKnown RBP9.31□□□□□ -0.92
NSMCE1-202ENST00000561960 TMEM82A0PJX8 343 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 OR5B21A6NL26 309 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 PRR23D1E9PI22 279 aaPredicted RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 NDUFAB1O14561 156 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 IGHV3-7P01780 117 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 PRR23D2P0DMB1 279 aaPredicted RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 H2AFXP16104 143 aaPredicted RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 GDNFP39905 211 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 LUMP51884 338 aaPredicted RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 RIPPLY1Q0D2K3 151 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 EGFEM1PQ0D2K5 195 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 GINS1Q14691 196 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 SNCBQ16143 134 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 MICAQ29983 383 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 BCDIN3DQ7Z5W3 292 aaKnown RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 TMEM179BQ7Z7N9 219 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 TRAPPC6BQ86SZ2 158 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 HS3ST5Q8IZT8 346 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 OR10G2Q8NGC3 310 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 OR11H6Q8NGC7 330 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 CMTM5Q96DZ9 223 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF714Q96N38 554 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 NRIP2Q9BQI9 281 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 CADM1Q9BY67 442 aaKnown RBP9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 MYLK2Q9H1R3 596 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 RASL12Q9NYN1 266 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 IKZF2Q9UKS7 526 aa9.3□□□□□ -0.92
NSMCE1-202ENST00000561960 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 NUDT19A8MXV4 375 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 K7N7A8 449 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 KRT36O76013 467 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 AMY1AP04745 511 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 AMY2AP04746 511 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 HSD17B1P14061 328 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 GABRR1P24046 479 aa9.29□□□□□ -0.92
NSMCE1-202ENST00000561960 BLVRAP53004 296 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms