RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 GLCCI1Q86VQ1 547 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 PPIL1Q9Y3C6 166 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DCTDP32321 178 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 BSXQ3C1V8 233 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 NHLRC1Q6VVB1 395 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR52N5Q8NH56 324 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 FLYWCH2Q96CP2 140 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF391Q9UJN7 358 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 LYG1Q8N1E2 194 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 APOBEC3DQ96AK3 386 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 VCX2Q9H322 139 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DHCR7Q9UBM7 475 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SIT1Q9Y3P8 196 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 LIMK1P53667 647 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 KMT5CQ86Y97 462 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 TIMP4Q99727 224 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 CRHP06850 196 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 DIO1P49895 249 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 HFEQ30201 348 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 PTX4Q96A99 478 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 CCR2P41597 374 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 LPAR6P43657 344 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 FUT3P21217 361 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 FABP5Q01469 135 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 PLAURQ03405 335 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SIX1Q15475 284 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 NCMAPQ5T1S8 102 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR8D4Q8NGM9 314 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 TMEM38BQ9NVV0 291 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 M0QZQ0 153 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 PPIHO43447 177 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 PXNP49023 591 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 IL24Q13007 206 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC39A5Q6ZMH5 540 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 AUNIPQ9H7T9 357 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPRY1O43609 319 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SRSF10O75494 262 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 POLR2IP36954 125 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 HINT1P49773 126 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLCO4C1Q6ZQN7 724 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 RPS19BP1Q86WX3 136 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 LIPGQ9Y5X9 500 aa12.44□□□□□ -0.42
CSPG4P12-202ENST00000559989 TIMP1P01033 207 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 LIAT1Q6ZQX7 453 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 MORN4Q8NDC4 146 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 PSMG3Q9BT73 122 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF385DQ9H6B1 395 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 FGF21Q9NSA1 209 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 FUT9Q9Y231 359 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 CDX2Q99626 313 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 WDR13Q9H1Z4 485 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 C3P01024 1663 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 RER1O15258 196 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 GNG3P63215 75 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 RNF165Q6ZSG1 346 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 RNF167Q9H6Y7 350 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 BTG2P78543 158 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 C9orf170A2RU37 121 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 RPL18Q07020 188 aaKnown RBP12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF273Q14593 569 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
CSPG4P12-202ENST00000559989 IGHV3-15A0A0B4J1V0 119 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 ASCL1P50553 236 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 DLK1P80370 383 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 CDK5R1Q15078 307 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 MIOXQ9UGB7 285 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR4A8P0C604 315 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 BRS3P32247 399 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 PARM1Q6UWI2 310 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 LMO3Q8TAP4 145 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SARGQ9BW04 601 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 J3KRW8 73 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 GABRA1P14867 456 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 GZMKP49863 264 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 WDR25Q64LD2 544 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPSB1Q96BD6 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms