RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 INSIG2Q9Y5U4 225 aa7.48□□□□□ -1.21
SPG11-207ENST00000558138 SONP18583 2426 aaKnown RBP7.48□□□□□ -1.21
SPG11-207ENST00000558138 FN1P02751 2386 aaKnown RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 IGHV3OR16-10A0A075B7F0 116 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 PPIAL4CA0A0B4J2A2 164 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 A0A1B0GW55 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 RFPL4AA6NLU0 287 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 RFPL4AL1F8VTS6 287 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 SPRY1O43609 319 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 RGS10O43665 173 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 SULT1B1O43704 296 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 ECDO95905 644 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 CDK1P06493 297 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 HSMCR30P0CW71 290 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 PGA5P0DJD9 388 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 TMEM225BP0DP42 221 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 EPHA1P21709 976 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 FPR2P25090 351 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 C21orf33P30042 268 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 IL24Q13007 206 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 XAF1Q6GPH4 301 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 RBMS3Q6XE24 437 aaKnown RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 Q6ZSR3 168 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 BTN2A1Q7KYR7 527 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 KRT74Q7RTS7 529 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 C1QL2Q7Z5L3 287 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 CALHM1Q8IU99 346 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 Q8IYB0 196 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 CMTM4Q8IZR5 234 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 FAM185AQ8N0U4 392 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 ASCC1Q8N9N2 400 aaKnown RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 DNAAF1Q8NEP3 725 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 TMEM106AQ96A25 262 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 RNF166Q96A37 237 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 GAFA1Q96PS6 74 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 S100A13Q99584 98 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 ZNF649Q9BS31 505 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 ANKRD60Q9BZ19 345 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 MS4A7Q9GZW8 240 aaPredicted RBP7.47□□□□□ -1.21
SPG11-207ENST00000558138 DNTTIP1Q9H147 329 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 SMURF1Q9HCE7 757 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 TAS2R4Q9NYW5 299 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 KAAG1Q9UBP8 84 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 RAB26Q9ULW5 256 aa7.47□□□□□ -1.21
SPG11-207ENST00000558138 TRAV40A0A0B4J280 105 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 C22orf46C9J442 243 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 SIGLEC5O15389 551 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 TCF21O43680 179 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 TOX4O94842 621 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 LIPFP07098 398 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 ACAA1P09110 424 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 PPIAL4GP0DN37 164 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 CALCBP10092 127 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 PSG2P11465 335 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 SELLP14151 372 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 PRKACAP17612 351 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 CELP19835 753 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 PRDX2P32119 198 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 CEBPDP49716 269 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 FGF12P61328 243 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 BLMHQ13867 455 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 YIF1BQ5BJH7 314 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 GPR157Q5UAW9 335 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 PRIMA1Q86XR5 153 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 ZSCAN4Q8NAM6 433 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 ZNRF1Q8ND25 227 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 OR13C5Q8NGS8 318 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 ANGPTL6Q8NI99 470 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 ZNF418Q8TF45 676 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 C22orf15Q8WYQ4 148 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 GHSRQ92847 366 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 NRIP2Q9BQI9 281 aa7.46□□□□□ -1.22
SPG11-207ENST00000558138 POLR3KQ9Y2Y1 108 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.22
SPG11-207ENST00000558138 ARHGAP32A7KAX9 2087 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 SETD2Q9BYW2 2564 aaPredicted RBP7.45□□□□□ -1.22
SPG11-207ENST00000558138 IGKV1D-17A0A075B6S4 117 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 IGKV1-27A0A075B6S5 117 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 IGKV1-9A0A0C4DH69 117 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 KIR2DS1A0A191URI9 304 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 A0A1W2PPH5 198 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 ZNF879B4DU55 563 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 GPR37O15354 613 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 OGG1O15527 345 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 ANGPTL7O43827 346 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 LALBAP00709 142 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 KNG1P01042 644 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 AVPP01185 164 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 BCL3P20749 454 aa7.45□□□□□ -1.22
SPG11-207ENST00000558138 GABRR1P24046 479 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms