RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TESCQ96BS2 214 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 DYNLL2Q96FJ2 89 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CPNE2Q96FN4 548 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 ZNF488Q96MN9 340 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 Q96MT0 163 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PPP1R2P1Q96PQ5 205 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 QKIQ96PU8 341 aaKnown RBP eCLIP1.97□□□□□ -2.09
SPG11-206ENST00000558093 C12orf57Q99622 126 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 GPR22Q99680 433 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 AIF1LQ9BQI0 150 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TLNRD1Q9H1K6 362 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 DHX35Q9H5Z1 703 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 C6orf50Q9HD87 102 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TMEM138Q9NPI0 162 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SDHAF2Q9NX18 166 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 GSKIPQ9P0R6 139 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TBX21Q9UL17 535 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TP53TG5Q9Y2B4 290 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 AK6Q9Y3D8 172 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 NUBP2Q9Y5Y2 271 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ALG5Q9Y673 324 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 NID2Q14112 1375 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 KIF24Q5T7B8 1368 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SNAPC4Q5SXM2 1469 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 A0A096LNJ9 63 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 A0A0A6YYD5 115 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TGIF2-C20orf24A0A0A6YYL0 155 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 A0A1B0GVG6 124 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TINCRA0A1B0GVN0 87 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 A0A1B0GW55 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 CCDC182A6NF36 153 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SMIM9A6NGZ8 99 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SEC14L6B5MCN3 397 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 HCRTR1O43613 425 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 ENTPD6O75354 484 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SPAG7O75391 227 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 EIF3GO75821 320 aaKnown RBP eCLIP1.96□□□□□ -2.1
SPG11-206ENST00000558093 TRAPPC6AO75865 159 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OR7A10O76100 309 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 CLIC3O95833 236 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 MOSP00540 346 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 HLA-AP01891 365 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 ISG15P05161 165 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 BCHEP06276 602 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 FAM228BP0C875 321 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L2P0CJ85 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L3P0CJ86 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L5P0CJ88 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L6P0CJ89 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L7P0CJ90 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 HIST1H1EP10412 219 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 HIST1H1CP16403 213 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 CELP19835 753 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 GZMHP20718 246 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 ADORA1P30542 326 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SERPINB5P36952 375 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 GPX4P36969 197 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 SRP9P49458 86 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 HNRNPA3P51991 378 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 UGT2B15P54855 530 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 AQP5P55064 265 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TCL1AP56279 114 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 CLDN6P56747 220 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TAS2R41P59536 307 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SNAP25P60880 206 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RAP1BP61224 184 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RPL31P62899 125 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 TFAMQ00059 246 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 IL5RAQ01344 420 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 APOFQ13790 326 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 PRPSAP1Q14558 356 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 KLHL12Q53G59 568 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SPIN4Q56A73 249 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RESP18Q5W5W9 173 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 FAM71E1Q6IPT2 247 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RPL13AP3Q6NVV1 102 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4L9Q6RFH8 374 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 Q6ZT83 130 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 ZNF571Q7Z3V5 609 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 THOC6Q86W42 341 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 SAXO1Q8IYX7 474 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OR2L13Q8N349 312 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 LRRC18Q8N456 261 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 FTMTQ8N4E7 242 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DHRSXQ8N5I4 330 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 HSD17B11Q8NBQ5 300 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OR5L1Q8NGL2 311 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OR51A7Q8NH64 312 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OR5K2Q8NHB8 316 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 COQ8AQ8NI60 647 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SLC7A13Q8TCU3 470 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SDR42E1Q8WUS8 393 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RAB8BQ92930 207 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RERGQ96A58 199 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 EXOSC8Q96B26 276 aaKnown RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 TAMM41Q96BW9 452 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SFRP2Q96HF1 295 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 ADTRPQ96IZ2 230 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 KCTD7Q96MP8 289 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms