RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SPNS3Q6ZMD2 512 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 FAM43BQ6ZT52 329 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 BZW1Q7L1Q6 419 aaKnown RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 NT5DC3Q86UY8 548 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 AMN1Q8IY45 258 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ZNF567Q8N184 647 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 CYP4Z2PQ8N1L4 340 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 INO80EQ8NBZ0 244 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 NDNFQ8TB73 568 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 TCP10LQ8TDR4 215 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ORAOV1Q8WV07 137 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 C22orf15Q8WYQ4 148 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 MRPL48Q96GC5 212 aaKnown RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 JSRP1Q96MG2 331 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 PEBP4Q96S96 227 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 AGMATQ9BSE5 352 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 STMN4Q9H169 189 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 LRRC19Q9H756 370 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 FANCEQ9HB96 536 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 LYRM4Q9HD34 91 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 RBM22Q9NW64 420 aaKnown RBP eCLIP0.56□□□□□ -2.32
SRP54-207ENST00000555535 VAX2Q9UIW0 290 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ZNF337Q9Y3M9 751 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 SAR1BQ9Y6B6 198 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 ZNF780BQ9Y6R6 833 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
SRP54-207ENST00000555535 ADAMTS7Q9UKP4 1686 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 MYH11P35749 1972 aa0.56□□□□□ -2.32
SRP54-207ENST00000555535 FLG2Q5D862 2391 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 A0A0B4J2E0 115 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 TRGV4A0A0C4DH28 118 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 LOC100653049A0A140TA62 436 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 A0A1W2PRD5 423 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 A8MWP4 228 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 GOLGA8TH3BQL2 631 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 K7ERS5 55 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 DFFAO00273 331 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 ENSAO43768 121 aaKnown RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 CRTAPO75718 401 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 UPK1BO75841 260 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 KRT34O76011 436 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR2A4O95047 310 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 TTC4O95801 387 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 IGHV3-53P01767 116 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR8G3PP0DMU2 310 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 MLNP12872 115 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 ZNF22P17026 224 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 PMCHP20382 165 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 GABRR2P28476 465 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 CFHR2P36980 270 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 ZNF83P51522 516 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 PSMD4P55036 377 aaKnown RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 YWHAEP62258 255 aaKnown RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 RAB11AP62491 216 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 KDSRQ06136 332 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 RAD51Q06609 339 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 IFFO1Q0D2I5 559 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 DNAJC3Q13217 504 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 C5orf64Q2M2E5 130 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 TTMPQ5BVD1 217 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 TTC32Q5I0X7 151 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 ANGPTL8Q6UXH0 198 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 FAM231DQ6ZW35 169 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 FAM122BQ7Z309 247 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 SCD5Q86SK9 330 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 LINC00596Q86U02 117 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 LYPD6Q86Y78 171 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 CPNE9Q8IYJ1 553 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 CMTM8Q8IZV2 173 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 RNF10Q8N5U6 811 aaKnown RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 PQLC3Q8N755 202 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 CCNYL1Q8N7R7 359 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR4C5Q8NGB2 326 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR10D4PQ8NGN7 298 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR5H2Q8NGV7 314 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR4K13Q8NH42 304 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 PIH1D2Q8WWB5 315 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.55□□□□□ -2.32
SRP54-207ENST00000555535 FAM19A4Q96LR4 140 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 C20orf166-AS1Q96NR2 134 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 SPACA5Q96QH8 159 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR2A7Q96R45 310 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR8B2Q96RD0 313 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 TRIB3Q96RU7 358 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 METTL26Q96S19 204 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 THTPAQ9BU02 230 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 HIGD2AQ9BW72 106 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 API5Q9BZZ5 524 aaKnown RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 ZNF436Q9C0F3 470 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 VPS37BQ9H9H4 285 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 RAB20Q9NX57 234 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 NAGKQ9UJ70 344 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 KLF13Q9Y2Y9 288 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 OR51B2Q9Y5P1 312 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 U3KQK5 164 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 MYOFQ9NZM1 2061 aa0.55□□□□□ -2.32
SRP54-207ENST00000555535 NPHP4O75161 1426 aaPredicted RBP0.55□□□□□ -2.32
SRP54-207ENST00000555535 ATAD5Q96QE3 1844 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 SERTM2A0A1B0GWG4 89 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 GOLGA6L4A6NEF3 574 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms