RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ESM1Q9NQ30 184 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 CENPMQ9NSP4 180 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 MRPL15Q9P015 296 aaKnown RBP3.44□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF319Q9P2F9 582 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 CTSZQ9UBR2 303 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 PPP1R3CQ9UQK1 317 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 INSIG2Q9Y5U4 225 aa3.44□□□□□ -1.86
VTI1B-203ENST00000554636 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 IGHV2-70DA0A0C4DH43 119 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 HMX3A6NHT5 357 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 LRRC30A6NM36 301 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 IFITM10A6NMD0 228 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 M0R129 80 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 LGALS8O00214 317 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 GNGT2O14610 69 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 XRCC2O43543 280 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 PRKYO43930 277 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 MITFO75030 526 aaPredicted RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 FCN3O75636 299 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 IGLV3-1P01715 115 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 HMGN1P05114 100 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ANXA8P13928 327 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 RPS2P15880 293 aaKnown RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ALOX5APP20292 161 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 CPT2P23786 658 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 POU1F1P28069 291 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 EPHA2P29317 976 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 CD80P33681 288 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 NAA10P41227 235 aaPredicted RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 RASSF2P50749 326 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 DAPP51397 102 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 HILS1P60008 231 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 FAM3AP98173 230 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 PAX8Q06710 450 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ALKBH1Q13686 389 aaKnown RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 HNF4GQ14541 408 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 TAF13Q15543 124 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR8G1Q15617 311 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ATP6AP1Q15904 470 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 TIGD6Q17RP2 521 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ESCO2Q56NI9 601 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SLC35D3Q5M8T2 416 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 LIPNQ5VXI9 398 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 WDR25Q64LD2 544 aaPredicted RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 LYPD2Q6UXB3 125 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF826PQ6ZT77 177 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 USP43Q70EL4 1123 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SHFQ7M4L6 423 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF367Q7RTV3 350 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SLC16A9Q7RTY1 509 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 CPOQ8IVL8 374 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 C11orf53Q8IXP5 236 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 MUC20Q8N307 709 aaPredicted RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 TEX29Q8N6K0 151 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ZDHHC22Q8N966 263 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 C19orf18Q8NEA5 215 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR8B12Q8NGG6 310 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR8B3Q8NGG8 313 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR11L1Q8NGX0 322 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR5K1Q8NHB7 308 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 NANPQ8TBE9 248 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 DNAJC9Q8WXX5 260 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ERGIC1Q969X5 290 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OTULINQ96BN8 352 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SGK3Q96BR1 496 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 NRBF2Q96F24 287 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 DUS3LQ96G46 650 aaKnown RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 REEP6Q96HR9 211 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR8B2Q96RD0 313 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SLC6A7Q99884 636 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 WDR12Q9GZL7 423 aaKnown RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 SLC22A4Q9H015 551 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 PPP1R3EQ9H7J1 279 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 FN3KRPQ9HA64 309 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF556Q9HAH1 456 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 UFSP2Q9NUQ7 469 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 DNAJC27Q9NZQ0 273 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 MIOXQ9UGB7 285 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 OR5V1Q9UGF6 321 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 COPS3Q9UNS2 423 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 NOP16Q9Y3C1 178 aaKnown RBP3.43□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4AQ9Y536 164 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
VTI1B-203ENST00000554636 TRAV40A0A0B4J280 105 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 A0A1B0GW55 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 OOEPA6NGQ2 149 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 A6NLC8 198 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ANKRD30BLA7E2S9 258 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PHYHO14832 338 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 GMDSO60547 372 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SRSF10O75494 262 aaKnown RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 LHBP01229 141 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 APOC1P02654 83 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PRSS2P07478 247 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 LYNP07948 512 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 MRPL3P09001 348 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms