RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 PGAM4Q8N0Y7 254 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 OR4X2Q8NGF9 303 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 NDNFQ8TB73 568 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 OR51E1Q8TCB6 317 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 DPF1Q92782 380 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 ZNF714Q96N38 554 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 CDRT15Q96T59 188 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 NIPSNAP1Q9BPW8 284 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 LAMP5Q9UJQ1 280 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 SAMHD1Q9Y3Z3 626 aaKnown RBP13.06□□□□□ -0.32
RAB5C-209ENST00000552162 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
RAB5C-209ENST00000552162 ACOD1A6NK06 481 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 H3BUI4 141 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 PRODHO43272 600 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 IGLV3-1P01715 115 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 COL10A1Q03692 680 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 CYP2R1Q6VVX0 501 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 TCF23Q7RTU1 214 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 LINC00482Q8N8I6 264 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 GPR61Q9BZJ8 451 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 PBOV1Q9GZY1 135 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 REEP1Q9H902 201 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-209ENST00000552162 SLC22A13Q9Y226 551 aa13.05□□□□□ -0.32
RAB5C-209ENST00000552162 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 PSMD9O00233 223 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 DHRS3O75911 302 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 LPLP06858 475 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 ALOX5APP20292 161 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 MPZP25189 248 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 GDPD3Q7L5L3 318 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 C16orf82Q7Z2V1 217 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 OR10G2Q8NGC3 310 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 TEAD3Q99594 435 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
RAB5C-209ENST00000552162 PQLC2LA1A4F0 135 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 ZNF737O75373 536 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 DNAJC8O75937 253 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-209ENST00000552162 HCCSP53701 268 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
RAB5C-209ENST00000552162 IL18R1Q13478 541 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 DCTN2Q13561 401 aaKnown RBP13.03□□□□□ -0.32
RAB5C-209ENST00000552162 ABCA11PQ4W5N1 156 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 CLVS2Q5SYC1 327 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 OR2T5Q6IEZ7 315 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 KCTD18Q6PI47 426 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-209ENST00000552162 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 OR2T29Q8NH02 315 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 CAPSLQ8WWF8 208 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 LIN7BQ9HAP6 207 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 SESN1Q9Y6P5 492 aa13.03□□□□□ -0.32
RAB5C-209ENST00000552162 CHRM2P08172 466 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 CD24P25063 80 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 ERVK11-1P61568 191 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 EDDM3AQ14507 147 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 ZNF829Q3KNS6 432 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-209ENST00000552162 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 TMEM42Q69YG0 159 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 DEGS2Q6QHC5 323 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 CPOQ8IVL8 374 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.33
RAB5C-209ENST00000552162 OR8H2Q8N162 312 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 CLEC7AQ9BXN2 247 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 MROQ9BYG7 248 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 TMEM133Q9H2Q1 129 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 MAGIXQ9H6Y5 334 aa13.02□□□□□ -0.33
RAB5C-209ENST00000552162 NUFIP1Q9UHK0 495 aaKnown RBP13.02□□□□□ -0.33
RAB5C-209ENST00000552162 hADV38S2A0JD32 116 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 DLGAP1O14490 977 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 CCDC159P0C7I6 412 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 SLC2A5P22732 501 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 HTR1DP28221 377 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ESRRGP62508 458 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 MEF2CQ06413 473 aaPredicted RBP13.01□□□□□ -0.33
RAB5C-209ENST00000552162 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ETV3LQ6ZN32 361 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ZBTB49Q6ZSB9 765 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 OR4P4Q8NGL7 312 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 FEVQ99581 238 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ELAC2Q9BQ52 826 aaKnown RBP13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ZNF649Q9BS31 505 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 CHID1Q9BWS9 393 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 TTTY10Q9BZA0 68 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 YIPF3Q9GZM5 350 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 ACTR3BQ9P1U1 418 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAB5C-209ENST00000552162 LINC00312Q9Y6C7 94 aa13.01□□□□□ -0.33
RAB5C-209ENST00000552162 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
RAB5C-209ENST00000552162 SH2D7A6NKC9 451 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms