RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CD3EP07766 207 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 BCL3P20749 454 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 TMEM50BP56557 158 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 ZNF154Q13106 437 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 ASAH1Q13510 395 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 CDNFQ49AH0 187 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 BEX5Q5H9J7 111 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 ZNF57Q68EA5 555 aaPredicted RBP25.88■■□□□ 1.73
CCM2-219ENST00000544363 DMRTC2Q8IXT2 367 aaPredicted RBP25.88■■□□□ 1.73
CCM2-219ENST00000544363 SCCPDHQ8NBX0 429 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 RAB3CQ96E17 227 aa25.88■■□□□ 1.73
CCM2-219ENST00000544363 PLSCR5A0PG75 271 aa25.87■■□□□ 1.73
CCM2-219ENST00000544363 FOXI3A8MTJ6 420 aaPredicted RBP25.87■■□□□ 1.73
CCM2-219ENST00000544363 MZT1Q08AG7 82 aa25.87■■□□□ 1.73
CCM2-219ENST00000544363 FBXL14Q8N1E6 418 aa25.87■■□□□ 1.73
CCM2-219ENST00000544363 RBMX2Q9Y388 322 aaKnown RBP25.87■■□□□ 1.73
CCM2-219ENST00000544363 CFAP46Q8IYW2 2715 aa25.87■■□□□ 1.73
CCM2-219ENST00000544363 EPG5Q9HCE0 2579 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 SULT1C2O00338 296 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 PLA2G10O15496 165 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 AKR7A2O43488 359 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 ORC5O43913 435 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 C1QL1O75973 258 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 MAB21L1Q13394 359 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 ADIPOQQ15848 244 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 PLAC9Q5JTB6 97 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 Q6ZTK2 550 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 GTF3AQ92664 365 aaKnown RBP25.86■■□□□ 1.73
CCM2-219ENST00000544363 OCEL1Q9H607 264 aa25.86■■□□□ 1.73
CCM2-219ENST00000544363 ZSCAN5BA6NJL1 495 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 VSTM5A8MXK1 200 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 GRPP07492 148 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 MELTFP08582 738 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 GNB3P16520 340 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 BLVRBP30043 206 aaPredicted RBP25.85■■□□□ 1.73
CCM2-219ENST00000544363 GDNFP39905 211 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 OR2Z1Q8NG97 314 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 RBFOX1Q9NWB1 397 aaKnown RBP25.85■■□□□ 1.73
CCM2-219ENST00000544363 KLK11Q9UBX7 282 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 ST3GAL6Q9Y274 331 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 POLDIP2Q9Y2S7 368 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 ADGRG4Q8IZF6 3080 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 TMEM235A6NFC5 223 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 RHBDL1O75783 438 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 OR4A8P0C604 315 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 HIST1H1DP16402 221 aaKnown RBP25.85■■□□□ 1.73
CCM2-219ENST00000544363 GABRR1P24046 479 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 GUCA2AQ02747 115 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 OXA1LQ15070 435 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 TAF9Q16594 264 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 PIGYQ3MUY2 71 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 BATF2Q8N1L9 274 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 CENPSQ8N2Z9 138 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 GPX8Q8TED1 209 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 POM121Q96HA1 1249 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 SCPEP1Q9HB40 452 aa25.85■■□□□ 1.73
CCM2-219ENST00000544363 ELF5Q9UKW6 265 aaPredicted RBP25.85■■□□□ 1.73
CCM2-219ENST00000544363 F8VVB4 439 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 F8VWA3 439 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 CDIPTO14735 213 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 PTTG1O95997 202 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 GSTP1P09211 210 aaKnown RBP25.84■■□□□ 1.73
CCM2-219ENST00000544363 RBM11P57052 281 aaKnown RBP25.84■■□□□ 1.73
CCM2-219ENST00000544363 FGF12P61328 243 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 TRIM16LQ309B1 348 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 TOMM5Q8N4H5 51 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 SEH1LQ96EE3 360 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 ARHGAP5-AS1Q96IT6 56 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 C11orf54Q9H0W9 315 aaPredicted RBP25.84■■□□□ 1.73
CCM2-219ENST00000544363 PLK3Q9H4B4 646 aa25.84■■□□□ 1.73
CCM2-219ENST00000544363 H7C417 338 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 SIAH2O43255 324 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 SRP9P49458 86 aaKnown RBP25.83■■□□□ 1.73
CCM2-219ENST00000544363 NKPD1Q17RQ9 610 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 DCDC5Q6ZRR9 648 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 RTN4RL2Q86UN3 420 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 MINDY2Q8NBR6 621 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 TLNRD1Q9H1K6 362 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 RHOFQ9HBH0 211 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 MTFP1Q9UDX5 166 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 RNF115Q9Y4L5 304 aa25.83■■□□□ 1.73
CCM2-219ENST00000544363 PLCE1Q9P212 2302 aa25.83■■□□□ 1.72
CCM2-219ENST00000544363 IGHV3-64DA0A0J9YX35 117 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 E7EQL1 145 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 GEMIN2O14893 280 aaKnown RBP25.82■■□□□ 1.72
CCM2-219ENST00000544363 RBBP9O75884 186 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 LPLP06858 475 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 CD200P41217 278 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 NHLRC3Q5JS37 347 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 ELMOD3Q96FG2 381 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 ZNF488Q96MN9 340 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 KCNK7Q9Y2U2 307 aa25.82■■□□□ 1.72
CCM2-219ENST00000544363 MFNGO00587 321 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 C11orf53Q8IXP5 236 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 PECRQ9BY49 303 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP25.81■■□□□ 1.721e-6■■■■□ 24.6
CCM2-219ENST00000544363 DEFB108AA8MXU0 73 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 ACAA1P09110 424 aaPredicted RBP25.81■■□□□ 1.72
CCM2-219ENST00000544363 GSTT2BP0CG30 244 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 ZNF81P51508 661 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms