RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 CSNK2A3Q8NEV1 391 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 OR10AD1Q8NGE0 317 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 ELMOD3Q96FG2 381 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 POM121Q96HA1 1249 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 TAAR6Q96RI8 345 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 PAPOLGQ9BWT3 736 aaKnown RBP12.19□□□□□ -0.46
LDB3-207ENST00000542786 PLEKHJ1Q9NW61 149 aa12.19□□□□□ -0.46
LDB3-207ENST00000542786 ZNF629Q9UEG4 869 aaPredicted RBP12.19□□□□□ -0.46
LDB3-207ENST00000542786 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 LILRA1O75019 489 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 TSC22D2O75157 780 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 DUS4LO95620 317 aaKnown RBP12.18□□□□□ -0.46
LDB3-207ENST00000542786 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
LDB3-207ENST00000542786 S100A1P23297 94 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 NPBWR2P48146 333 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 NPY4RP50391 375 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 TAS2R31P59538 309 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 SEC61A1P61619 476 aaKnown RBP12.18□□□□□ -0.46
LDB3-207ENST00000542786 CEACAM21Q3KPI0 293 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 ZNF660Q6AZW8 331 aaPredicted RBP12.18□□□□□ -0.46
LDB3-207ENST00000542786 ELP2Q6IA86 826 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 LPCAT3Q6P1A2 487 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 SLC25A26Q70HW3 274 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 OR51F2Q8NH61 342 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
LDB3-207ENST00000542786 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 CACNA1GO43497 2377 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 GVINP1Q7Z2Y8 2422 aa12.18□□□□□ -0.46
LDB3-207ENST00000542786 RPS2P15880 293 aaKnown RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 APLNRP35414 380 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 PMELP40967 661 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 SUPT4H1P63272 117 aaKnown RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 TMEM200AQ86VY9 491 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 C9orf106Q8NAJ2 232 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 NANOS1Q8WY41 292 aaKnown RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 BOD1Q96IK1 185 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 PPA2Q9H2U2 334 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 OR5H14A6NHG9 310 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 SDCBPO00560 298 aaPredicted RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 PDCD6O75340 191 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 CFDP00746 253 aaPredicted RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 FCGR3AP08637 254 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 NFYAP23511 347 aaPredicted RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 KIR2DL2P43627 348 aaPredicted RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 OPCMLQ14982 345 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 NHLRC3Q5JS37 347 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 GCNT2Q8N0V5 402 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 SLC30A7Q8NEW0 376 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 WNT2BQ93097 391 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 TRIB1Q96RU8 372 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 ST3GAL6Q9Y274 331 aa12.17□□□□□ -0.46
LDB3-207ENST00000542786 NOP16Q9Y3C1 178 aaKnown RBP12.17□□□□□ -0.46
LDB3-207ENST00000542786 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 RIF1Q5UIP0 2472 aaKnown RBP12.16□□□□□ -0.46
LDB3-207ENST00000542786 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 F8VVB4 439 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 F8VWA3 439 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 SNAPC5O75971 98 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 CELA3BP08861 270 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 AKR1C4P17516 323 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 COX5AP20674 150 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 OR3A3P47888 321 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 IL13RA1P78552 427 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 SORDQ00796 357 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
LDB3-207ENST00000542786 GABRA6Q16445 453 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 ACSF3Q4G176 576 aaPredicted RBP12.16□□□□□ -0.46
LDB3-207ENST00000542786 TMEM128Q5BJH2 165 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 Q6ZT83 130 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 DYRK2Q92630 601 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 LIME1Q9H400 295 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 ANXA10Q9UJ72 324 aa12.16□□□□□ -0.46
LDB3-207ENST00000542786 ZFHX2Q9C0A1 2572 aaPredicted RBP12.15□□□□□ -0.46
LDB3-207ENST00000542786 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 RPS10-NUDT3A0A1W2PQS6 291 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 J3QW42 95 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 CCSO14618 274 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms