RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MINDY2Q8NBR6 621 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 FCAMRQ8WWV6 532 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 URM1Q9BTM9 101 aaKnown RBP23.64■■□□□ 1.38
CCM2-218ENST00000541586 UBTD1Q9HAC8 227 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 OR5B21A6NL26 309 aa23.64■■□□□ 1.37
CCM2-218ENST00000541586 HACD4Q5VWC8 232 aa23.64■■□□□ 1.37
CCM2-218ENST00000541586 Q6ZNX1 250 aa23.64■■□□□ 1.37
CCM2-218ENST00000541586 OR8G5Q8NG78 346 aa23.64■■□□□ 1.37
CCM2-218ENST00000541586 OR51F2Q8NH61 342 aa23.64■■□□□ 1.37
CCM2-218ENST00000541586 C11orf54Q9H0W9 315 aaPredicted RBP23.64■■□□□ 1.37
CCM2-218ENST00000541586 HECTD1Q9ULT8 2610 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 TIMM8AO60220 97 aaPredicted RBP23.63■■□□□ 1.37
CCM2-218ENST00000541586 SSTR2P30874 369 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 GNG3P63215 75 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 FAM189A2Q15884 450 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 MSMPQ1L6U9 139 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 DNM1P46Q6ZS02 220 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 SLC25A26Q70HW3 274 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 GDPD3Q7L5L3 318 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 ZSCAN4Q8NAM6 433 aaPredicted RBP23.63■■□□□ 1.37
CCM2-218ENST00000541586 NUP37Q8NFH4 326 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 OR10R2Q8NGX6 335 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 OR8S1Q8NH09 359 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 SELENOIQ9C0D9 397 aa23.63■■□□□ 1.37
CCM2-218ENST00000541586 ZMAT3Q9HA38 289 aaKnown RBP23.63■■□□□ 1.37
CCM2-218ENST00000541586 ORC5O43913 435 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 HTR3BO95264 441 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 CHRM2P08172 466 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 GLRXP35754 106 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 GDNFP39905 211 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 GPR176Q14439 515 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 FAM89BQ8N5H3 189 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 OR51T1Q8NGJ9 327 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 NUDT16L1Q9BRJ7 211 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 ADAT1Q9BUB4 502 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 IL36GQ9NZH8 169 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 KLK11Q9UBX7 282 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 LRBAP50851 2863 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 SSX4O60224 188 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 ZNF780AO75290 641 aaPredicted RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 CSTBP04080 98 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 SRP9P49458 86 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 CHST4Q8NCG5 386 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 FBXW5Q969U6 566 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 RTL8AQ9BWD3 113 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 TM2D1Q9BX74 207 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 TMEM100Q9NV29 134 aa23.62■■□□□ 1.37
CCM2-218ENST00000541586 RBMX2Q9Y388 322 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 NOP16Q9Y3C1 178 aaKnown RBP23.62■■□□□ 1.37
CCM2-218ENST00000541586 CENPEQ02224 2701 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 SOCS1O15524 211 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 ZNF250P15622 560 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 PRSS3P35030 304 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 RFX2P48378 723 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 ZNF260Q3ZCT1 412 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 OR56B1Q8NGI3 324 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 MICU1Q9BPX6 476 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 DUSP13Q9UII6 198 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 HRNRQ86YZ3 2850 aaPredicted RBP23.61■■□□□ 1.37
CCM2-218ENST00000541586 PLCE1Q9P212 2302 aa23.61■■□□□ 1.37
CCM2-218ENST00000541586 HS3ST1O14792 307 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 SFTPBP07988 381 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 GTF2F2P13984 249 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 SPNP16150 400 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 GUCA2AQ02747 115 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 ZNF573Q86YE8 665 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 TOMM5Q8N4H5 51 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 TMEM171Q8WVE6 324 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 AQP3Q92482 292 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 ELF5Q9UKW6 265 aaPredicted RBP23.6■■□□□ 1.37
CCM2-218ENST00000541586 BAHCC1Q9P281 2608 aa23.6■■□□□ 1.37
CCM2-218ENST00000541586 VSTM5A8MXK1 200 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 H0YL77 283 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 OR4A8P0C604 315 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 RPS23P62266 143 aaKnown RBP23.59■■□□□ 1.37
CCM2-218ENST00000541586 OR8G1Q15617 311 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 CDNFQ49AH0 187 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 NRARPQ7Z6K4 114 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 RTN4RL2Q86UN3 420 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 LRP11Q86VZ4 500 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 SAXO1Q8IYX7 474 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 Q96M66 194 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 DHRS9Q9BPW9 319 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 OR51I2Q9H344 312 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 TMEM235A6NFC5 223 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 LYRM1O43325 122 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 CPT2P23786 658 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 APOBEC3AP31941 199 aaPredicted RBP23.59■■□□□ 1.37
CCM2-218ENST00000541586 TMEM50BP56557 158 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 HAGHLQ6PII5 290 aaPredicted RBP23.59■■□□□ 1.37
CCM2-218ENST00000541586 Q6ZTK2 550 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 SLAMF9Q96A28 289 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 COX4I2Q96KJ9 171 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 SLC22A4Q9H015 551 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 PLEKHF2Q9H8W4 249 aa23.59■■□□□ 1.37
CCM2-218ENST00000541586 MLNRO43193 412 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 GNB3P16520 340 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 NPBWR2P48146 333 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 ADIPOQQ15848 244 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 FAM76BQ5HYJ3 339 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms