RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 TAAR3PQ9P1P4 343 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 A0A0A6YYD4 124 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 PTBP3O95758 552 aaKnown RBP15.07■□□□□ 0
CLIP1-215ENST00000541108 OR4A8P0C604 315 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 PRSS3P35030 304 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 ZNF260Q3ZCT1 412 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 NHLRC3Q5JS37 347 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 Q8IYB0 196 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 CELF2-AS1Q8N7Q2 184 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 OR10AD1Q8NGE0 317 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 RAB3CQ96E17 227 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 ZDHHC8Q9ULC8 765 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 RBMX2Q9Y388 322 aaKnown RBP15.07■□□□□ 0
CLIP1-215ENST00000541108 RNF115Q9Y4L5 304 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 ZFYVE26Q68DK2 2539 aa15.07■□□□□ 0
CLIP1-215ENST00000541108 ANKHD1Q8IWZ3 2542 aaKnown RBP15.07■□□□□ 0
CLIP1-215ENST00000541108 FOXI3A8MTJ6 420 aaPredicted RBP15.06■□□□□ 0
CLIP1-215ENST00000541108 CD200P41217 278 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 NPBWR2P48146 333 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 INPP1P49441 399 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 TMEM50BP56557 158 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FGF12P61328 243 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 DGCR2P98153 550 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 SLAMF9Q96A28 289 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 SCPEP1Q9HB40 452 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.06■□□□□ 0
CLIP1-215ENST00000541108 ST3GAL6Q9Y274 331 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A10PA6NDY2 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A18PA6NE21 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A16PA6NEW6 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A20PA6NIJ5 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A8PA6NJQ4 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A7PA6NKC0 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 VGLL3A8MV65 326 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A22PA8MWA6 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A12PA8MX19 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A5PA8MXJ8 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 DEFB108AA8MXU0 73 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A23PA8MXZ1 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 F5H5P2 479 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 SOCS1O15524 211 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 SYNGR1O43759 233 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 GSTP1P09211 210 aaKnown RBP15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A15PP0C7V4 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A13PP0C7W8 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A14PP0C7W9 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FAM90A24PP0C7X0 464 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 APOBEC3AP31941 199 aaPredicted RBP15.06■□□□□ 0
CLIP1-215ENST00000541108 SERPINF1P36955 418 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 KIR2DL3P43628 341 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 SSBP1Q04837 148 aaKnown RBP15.06■□□□□ 0
CLIP1-215ENST00000541108 NKPD1Q17RQ9 610 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 CDNFQ49AH0 187 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 Q6ZTK2 550 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 FBXL14Q8N1E6 418 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 CHST4Q8NCG5 386 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 OR2Z1Q8NG97 314 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 OR52I2Q8NH67 350 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 TMEM204Q9BSN7 226 aa15.06■□□□□ 0
CLIP1-215ENST00000541108 WIPF3A6NGB9 483 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 ZSCAN5BA6NJL1 495 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 E7EQL1 145 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 H3BUI4 141 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 CDIPTO14735 213 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 TPD52L2O43399 206 aaKnown RBP15.05■□□□□ -0
CLIP1-215ENST00000541108 ORC5O43913 435 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 NOS1APO75052 506 aaPredicted RBP15.05■□□□□ -0
CLIP1-215ENST00000541108 GRPP07492 148 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 ADH4P08319 380 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 CD3GP09693 182 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 BCL3P20749 454 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 BLVRBP30043 206 aaPredicted RBP15.05■□□□□ -0
CLIP1-215ENST00000541108 ZNF81P51508 661 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 RBM11P57052 281 aaKnown RBP15.05■□□□□ -0
CLIP1-215ENST00000541108 ASAH1Q13510 395 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 POC5Q8NA72 575 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 DIRC2Q96SL1 478 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 TBC1D24Q9ULP9 559 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 HSF4Q9ULV5 492 aa15.05■□□□□ -0
CLIP1-215ENST00000541108 SPTBN1Q01082 2364 aaKnown RBP15.05■□□□□ -0
CLIP1-215ENST00000541108 MEIOCA2RUB1 952 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 H7C417 338 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 SIAH2O43255 324 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 LANCL1O43813 399 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 RHBDL1O75783 438 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 RBBP9O75884 186 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 PTHLHP12272 177 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 HIST1H1DP16402 221 aaKnown RBP15.04■□□□□ -0
CLIP1-215ENST00000541108 ERVK11-1P61568 191 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 TAF9Q16594 264 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 PNLIPRP3Q17RR3 467 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 PLAC9Q5JTB6 97 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 LINC00596Q86U02 117 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 C11orf53Q8IXP5 236 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 MINDY2Q8NBR6 621 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 GPX8Q8TED1 209 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 CHPT1Q8WUD6 406 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 DEDD2Q8WXF8 326 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 SEH1LQ96EE3 360 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 ELMOD3Q96FG2 381 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms