RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 COPZ2Q9P299 210 aa12.15□□□□□ -0.46
CYB561A3-216ENST00000540755 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
CYB561A3-216ENST00000540755 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
CYB561A3-216ENST00000540755 A0A0A6YYD4 124 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 A0A1B0GWJ7 208 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PLA2G10O15496 165 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 LYRM1O43325 122 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 LANCL1O43813 399 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 TIMM8AO60220 97 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PLATP00750 562 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 CD3GP09693 182 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 GTF2F2P13984 249 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 CPT2P23786 658 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 VEGFCP49767 419 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 TMEM200AQ86VY9 491 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR51F2Q8NH61 342 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 TMEM171Q8WVE6 324 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 AQP3Q92482 292 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 NICN1Q9BSH3 213 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 ADAT1Q9BUB4 502 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PKIBQ9C010 78 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 F8P00451 2351 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 TMEM210A6NLX4 147 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 AKR7A2O43488 359 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 HTR3BO95264 441 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 CYB5AP00167 134 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PTHLHP12272 177 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 MPZP25189 248 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PRSS3P35030 304 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 GDNFP39905 211 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 RFX2P48378 723 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SSBP1Q04837 148 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR8G1Q15617 311 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 MSMPQ1L6U9 139 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF57Q68EA5 555 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SP5Q6BEB4 398 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 PLET1Q6UQ28 207 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SLC25A26Q70HW3 274 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 NRARPQ7Z6K4 114 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 MKXQ8IYA7 352 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SPERTQ8NA61 448 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 Q8NFD4 153 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 GCDHQ92947 438 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 RADILQ96JH8 1075 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 Q96M66 194 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SELENOIQ9C0D9 397 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 OR51I2Q9H344 312 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 SCPEP1Q9HB40 452 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 KCNJ16Q9NPI9 418 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 NDRG3Q9UGV2 375 aa12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-216ENST00000540755 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 HCFC1P51610 2035 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 MEIOCA2RUB1 952 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 NAP1L6A6NFF2 107 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 ABCD4O14678 606 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 MLNRO43193 412 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 ORC5O43913 435 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 MELTFP08582 738 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 IL24Q13007 206 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 CDSNQ15517 529 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 RNASE12Q5GAN4 147 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 ELP2Q6IA86 826 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 Q6ZTK2 550 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 TOMM5Q8N4H5 51 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 CHST4Q8NCG5 386 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 GPX8Q8TED1 209 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 FZR1Q9UM11 496 aa12.13□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM240BA0A1B0GVZ2 78 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 H7C417 338 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 J3QT63 122 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 SOCS1O15524 211 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 LPLP06858 475 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 SFTPBP07988 381 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 GSTP1P09211 210 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms