RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 STMN2Q93045 179 aa9.65□□□□□ -0.86
SVIP-205ENST00000533774 RGCCQ9H4X1 137 aa9.65□□□□□ -0.86
SVIP-205ENST00000533774 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
SVIP-205ENST00000533774 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 LY86O95711 162 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 NCK1P16333 377 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 SPI1P17947 270 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 HTR1DP28221 377 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 EDDM3BP56851 147 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 LIPEQ05469 1076 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 CRMP1Q14194 572 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 PLBD1Q6P4A8 553 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 SLC15A3Q8IY34 581 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 ZNF676Q8N7Q3 588 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 TPRX1Q8N7U7 411 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 OR5M8Q8NGP6 311 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 ZNF714Q96N38 554 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 HIST1H2AAQ96QV6 131 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 CDRT15Q96T59 188 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 TMEM133Q9H2Q1 129 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 HES4Q9HCC6 221 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 LYVE1Q9Y5Y7 322 aa9.64□□□□□ -0.87
SVIP-205ENST00000533774 TMEM82A0PJX8 343 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 NME4O00746 187 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 NOS1APO75052 506 aaPredicted RBP9.63□□□□□ -0.87
SVIP-205ENST00000533774 BRS3P32247 399 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 MAP2K3P46734 347 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 KLF10Q13118 480 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 IL18R1Q13478 541 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 KRT72Q14CN4 511 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 ZNF260Q3ZCT1 412 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 UTF1Q5T230 341 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 MOB3CQ70IA8 216 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 ASCC1Q8N9N2 400 aaKnown RBP9.63□□□□□ -0.87
SVIP-205ENST00000533774 OR5A2Q8NGI9 324 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 OR6K6Q8NGW6 343 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 OR4Q3Q8NH05 313 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 CHPT1Q8WUD6 406 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 FAM32AQ9Y421 112 aaKnown RBP9.63□□□□□ -0.87
SVIP-205ENST00000533774 HECTD4Q9Y4D8 3996 aa9.63□□□□□ -0.87
SVIP-205ENST00000533774 FAM172BPA6NC97 362 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 F8VVB4 439 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 F8VWA3 439 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 H3BUI4 141 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 NXPH2O95156 264 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 IGLV1-47P01700 117 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 APOC1P02654 83 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 HCKP08631 526 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 GDNFP39905 211 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 ERVK11-1P61568 191 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 SNAPC1Q16533 368 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 C16orf89Q6UX73 402 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 ERI1Q8IV48 349 aaKnown RBP9.62□□□□□ -0.87
SVIP-205ENST00000533774 OR6N2Q8NGY6 317 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 MED20Q9H944 212 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 KRCC1Q9NPI7 259 aaPredicted RBP9.62□□□□□ -0.87
SVIP-205ENST00000533774 GID8Q9NWU2 228 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 TAS2R1Q9NYW7 299 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 RAB21Q9UL25 225 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 SLC22A13Q9Y226 551 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 DNAH10Q8IVF4 4471 aa9.62□□□□□ -0.87
SVIP-205ENST00000533774 A0A0G2JND7 137 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 RBMY1BA6NDE4 496 aaKnown RBP9.61□□□□□ -0.87
SVIP-205ENST00000533774 RBMY1EA6NEQ0 496 aaKnown RBP9.61□□□□□ -0.87
SVIP-205ENST00000533774 OR5B21A6NL26 309 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 J3QT63 122 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 GSTA4O15217 222 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 H2BFMP0C1H6 154 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 RBMY1DP0C7P1 496 aaKnown RBP9.61□□□□□ -0.87
SVIP-205ENST00000533774 HAAOP46952 286 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 BDH1Q02338 343 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 EDDM3AQ14507 147 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 KIR2DS1Q14954 304 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 PRAMEF5Q5TYX0 476 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 PLCXD3Q63HM9 321 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 TRPM8Q7Z2W7 1104 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 ABHD12Q8N2K0 398 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 OR52N4Q8NGI2 321 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 ISOC1Q96CN7 298 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 RCN3Q96D15 328 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 PAPOLBQ9NRJ5 636 aaKnown RBP9.61□□□□□ -0.87
SVIP-205ENST00000533774 KLHDC2Q9Y2U9 406 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 MOB4Q9Y3A3 225 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 CDH10Q9Y6N8 788 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 HSPE1-MOB4S4R3N1 261 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
SVIP-205ENST00000533774 FAM90A18PA6NE21 464 aa9.6□□□□□ -0.87
SVIP-205ENST00000533774 FAM90A16PA6NEW6 464 aa9.6□□□□□ -0.87
SVIP-205ENST00000533774 FAM90A20PA6NIJ5 464 aa9.6□□□□□ -0.87
SVIP-205ENST00000533774 TRIM64CA6NLI5 447 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms