RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 OR6K3Q8NGY3 331 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 OR8U1Q8NH10 309 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 HAS2Q92819 552 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 ISOC2Q96AB3 205 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 TIMM8BQ9Y5J9 83 aaPredicted RBP10.88□□□□□ -0.67
SCN3B-206ENST00000530277 LHFPL6Q9Y693 200 aa10.88□□□□□ -0.67
SCN3B-206ENST00000530277 C1QL1O75973 258 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 IFNA17P01571 189 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 CD46P15529 392 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 ID4P47928 161 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 ISXQ2M1V0 245 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 OR6S1Q8NH40 331 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 OR2V1Q8NHB1 315 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 MOB1AQ9H8S9 216 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 GNG12Q9UBI6 72 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 CEBPZOSA8MTT3 80 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 SNAPC5O75971 98 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 CA6P23280 308 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 TGFBR3Q03167 851 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 UNQ9370/PRO34162Q6UXP9 181 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 EXTL1Q92935 676 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 MRPL24Q96A35 216 aaKnown RBP10.87□□□□□ -0.67
SCN3B-206ENST00000530277 HES7Q9BYE0 225 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 AMDHD2Q9Y303 409 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 PPIAP62937 165 aaKnown RBP10.87□□□□□ -0.67
SCN3B-206ENST00000530277 RHEBQ15382 184 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 DPPA2Q7Z7J5 298 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 TIMP4Q99727 224 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 FN3KRPQ9HA64 309 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 RHOFQ9HBH0 211 aa10.87□□□□□ -0.67
SCN3B-206ENST00000530277 DEGS1O15121 323 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 TIMM8AO60220 97 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 GCH1P30793 250 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 SUMO3P55854 103 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 STPG2Q8N412 459 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 OR11L1Q8NGX0 322 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 GPX7Q96SL4 187 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 PFDN5Q99471 154 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 CDX2Q99626 313 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 A0A1W2PQD3 144 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 FAM24AA6NFZ4 105 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 CPN1P15169 458 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 UBE2KP61086 200 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 GGNBP1Q5YKI7 109 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF660Q6AZW8 331 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 DEGS2Q6QHC5 323 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 OR6X1Q8NH79 312 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 TGIF2Q9GZN2 237 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 TRBV23-1A0A0A0MS06 115 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 MPTX1A8MV57 137 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 J3QRE1 110 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 DUS4LO95620 317 aaKnown RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 CRHP06850 196 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 ALDH3B1P43353 468 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF133P52736 654 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-206ENST00000530277 TSC22D1Q15714 1073 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 C21orf62-AS1Q17RA5 79 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 TUSC5Q8IXB3 177 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 ARRDC1Q8N5I2 433 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 ADPRHL1Q8NDY3 354 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 CMTM3Q96MX0 182 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 KCNK17Q96T54 332 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
SCN3B-206ENST00000530277 GPR37O15354 613 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 LYZL6O75951 148 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 MLF1P58340 268 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 POLR2GP62487 172 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF574Q6ZN55 896 aaPredicted RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 DTWD2Q8NBA8 298 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 LPAR5Q9H1C0 372 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 HSPB2A8KAH6 182 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF724A8MTY0 619 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 CDRT15L2A8MXV6 281 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 PRSS44E7EML9 344 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 RAB11AP62491 216 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 TGIF1Q15583 401 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 OR1C1Q15619 314 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 HSPB2Q16082 182 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 SNAI3Q3KNW1 292 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 WDR74Q6RFH5 385 aaPredicted RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 OR5AP2Q8NGF4 316 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 RXFP4Q8TDU9 374 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 PP6455Q8WZ26 134 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 INTS12Q96CB8 462 aaKnown RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 PECRQ9BY49 303 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 OPA3Q9H6K4 179 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 MMP24Q9Y5R2 645 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 A0A1B0GTQ1 180 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 PLSCR5A0PG75 271 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 DEFB108AA8MXU0 73 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms