RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TGM3Q08188 693 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 BST2Q10589 180 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 CLINT1Q14677 625 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CDK10Q15131 360 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CDNFQ49AH0 187 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PRAMEF5Q5TYX0 476 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PRAMEF6Q5VXH4 476 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ANKRD22Q5VYY1 191 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 SAXO2Q658L1 398 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ZNF880Q6PDB4 577 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 EIF3MQ7L2H7 374 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 PID1Q7Z2X4 250 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 HMGN2P46Q86SG4 172 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 MRPL52Q86TS9 123 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 TMEM135Q86UB9 458 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 OFCC1Q8IZS5 231 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 LGI3Q8N145 548 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 FBXL13Q8NEE6 735 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 B3GNT7Q8NFL0 401 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 OR5H6Q8NGV6 325 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 OR10J5Q8NHC4 309 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 RHEBL1Q8TAI7 183 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 GLYATL2Q8WU03 294 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 AP3S1Q92572 193 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 RAB1CQ92928 201 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 DCPSQ96C86 337 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 TM4SF18Q96CE8 201 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PFDN5Q99471 154 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ATP5SQ99766 215 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 DDA1Q9BW61 102 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 MROQ9BYG7 248 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 IL22Q9GZX6 179 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 GOLPH3Q9H4A6 298 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ASB7Q9H672 318 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 UBE2ZQ9H832 354 aaPredicted RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 CCNB1IP1Q9NPC3 277 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 USE1Q9NZ43 259 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 GLTPQ9NZD2 209 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PDP1Q9P0J1 537 aaPredicted RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 VAPAQ9P0L0 249 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ZNRD1Q9P1U0 126 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 C3orf18Q9UK00 162 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 TSSC4Q9Y5U2 329 aaPredicted RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 A2MP01023 1474 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PLA2R1Q13018 1463 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CCDC18Q5T9S5 1454 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ADGRA3Q8IWK6 1321 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 MYH7BA7E2Y1 1941 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 PTPRTO14522 1441 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 KDM6AO15550 1401 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 A0A1B0GV72 72 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 LINC00862A6NCI5 91 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SERPINE3A8MV23 424 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 F8VP50 259 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 G3V2T6 193 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 H7C2Y5 167 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 I3L4J1 428 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 BHLHE40O14503 412 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SCAMP2O15127 329 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 GCM2O75603 506 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 PPBPP02775 128 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ZNF806P0C7X5 589 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SCGB1A1P11684 91 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SPI1P17947 270 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 IL12BP29460 328 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 OR1E1P30953 314 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 MPIP34949 423 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 GPX4P36969 197 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 IDH3GP51553 393 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 UBE2G2P60604 165 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 PSPHP78330 225 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 TRIP13Q15645 432 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 C5orf64Q2M2E5 130 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 DEFB115Q30KQ5 88 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 BSXQ3C1V8 233 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ACTBL2Q562R1 376 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 C9orf135Q5VTT2 229 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ZNF470Q6ECI4 717 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ULK3Q6PHR2 472 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SLC25A34Q6PIV7 304 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SHISA6Q6ZSJ9 500 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SLC35D2Q76EJ3 337 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 CROCCP2Q86T23 111 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 RBM45Q8IUH3 476 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 UBALD2Q8IYN6 164 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SELENOHQ8IZQ5 122 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 OSR2Q8N2R0 312 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 NOXO1Q8NFA2 376 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 OR1M1Q8NGA1 313 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 OR13C9Q8NGT0 318 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 OR51A7Q8NH64 312 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 OR2V1Q8NHB1 315 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ZNF502Q8TBZ5 544 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 NEK7Q8TDX7 302 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 CXorf40AQ8TE69 158 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 ABHD3Q8WU67 409 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 S100ZQ8WXG8 99 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 GTF2H4Q92759 462 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms