RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF728P0DKX0 622 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 ANOS1P23352 680 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 GABRR1P24046 479 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CLRN1P58418 232 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 GNMTQ14749 295 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 OR52M1Q8NGK5 317 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 NIPSNAP3BQ9BS92 247 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 HDHD3Q9BSH5 251 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-214ENST00000528165 TGIF2Q9GZN2 237 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 COPS7AQ9UBW8 275 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CDRT15L2A8MXV6 281 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CCL1P22362 96 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CDAP32320 146 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF266Q14584 549 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SSX2Q16385 188 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 THEM4Q5T1C6 240 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SSX3Q99909 188 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 F5P12259 2224 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 RER1O15258 196 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 GLI4P10075 376 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF43P17038 809 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 NDUFB7P17568 137 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 DMRTC2Q8IXT2 367 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-214ENST00000528165 OR14K1Q8NGZ2 314 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SUCNR1Q9BXA5 334 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 SERINC1Q9NRX5 453 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 IGKV3D-11A0A0A0MRZ8 115 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 ZNF724A8MTY0 619 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 SFTPDP35247 375 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 ALDH3B1P43353 468 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 FIP1L1Q6UN15 594 aaKnown RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 LIAT1Q6ZQX7 453 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 OR8G5Q8NG78 346 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 DDIT4LQ96D03 193 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 MRGPRX1Q96LB2 322 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 PISDQ9UG56 409 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 FAM230AA0A1W2PPH8 454 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 H3BML4 177 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 FCGR2AP12318 317 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 GLIPR1P48060 266 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 FXYD4P59646 89 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 TMEM176BQ3YBM2 270 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 SPSB3Q6PJ21 355 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 UNQ6494/PRO21346Q6UXR6 183 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 LGI3Q8N145 548 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 OR14L1PQ8NHC6 308 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 LIN37Q96GY3 246 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 C18orf12Q96KH6 178 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 ABHD14AQ9BUJ0 271 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 LIME1Q9H400 295 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 SDHAF3Q9NRP4 125 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 NECAP2Q9NVZ3 263 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 KLHL13Q9P2N7 655 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 NXT1Q9UKK6 140 aaKnown RBP12.83□□□□□ -0.36
CAPN1-214ENST00000528165 VDAC3Q9Y277 283 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
CAPN1-214ENST00000528165 TRGC1P0CF51 173 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 LRTM2Q8N967 370 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 M1APQ8TC57 530 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 ST8SIA1Q92185 356 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 MRPL13Q9BYD1 178 aaKnown RBP12.82□□□□□ -0.36
CAPN1-214ENST00000528165 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 LRP4O75096 1905 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 ZNF205O95201 554 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-214ENST00000528165 NSDHLQ15738 373 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 AKR1C8PQ5T2L2 129 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 SLC22A25Q6T423 547 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 SLC16A14Q7RTX9 510 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 PRSS58Q8IYP2 241 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 BOD1Q96IK1 185 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-214ENST00000528165 VN1R1Q9GZP7 353 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 RP1P56715 2156 aa12.82□□□□□ -0.36
CAPN1-214ENST00000528165 ADAM10O14672 748 aa12.81□□□□□ -0.36
CAPN1-214ENST00000528165 SCAF4O95104 1147 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms