RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ARHGAP24Q8N264 748 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 OR11H6Q8NGC7 330 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 CHID1Q9BWS9 393 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 GPR173Q9NS66 373 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 PITPNC1Q9UKF7 332 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 COPS3Q9UNS2 423 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 POLDIP2Q9Y2S7 368 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 KMT2CQ8NEZ4 4911 aaKnown RBP18.97■□□□□ 0.63
CPSF1-202ENST00000527827 CCDC182A6NF36 153 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 B2RBV5 119 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 K7N7A8 449 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 ZNF254O75437 659 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 TTRP02766 147 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 MRPL3P09001 348 aaKnown RBP18.96■□□□□ 0.63
CPSF1-202ENST00000527827 JUNBP17275 347 aaPredicted RBP18.96■□□□□ 0.63
CPSF1-202ENST00000527827 MPZP25189 248 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 MNAT1P51948 309 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 TMEM95Q3KNT9 176 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 TMEM236Q5W0B7 351 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 PIGWQ7Z7B1 504 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 ZNF679Q8IYX0 411 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 WFDC9Q8NEX5 89 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 OR13D1Q8NGV5 346 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 TTTY10Q9BZA0 68 aa18.96■□□□□ 0.63
CPSF1-202ENST00000527827 MEX3AA1L020 520 aaKnown RBP18.95■□□□□ 0.62
CPSF1-202ENST00000527827 SRSF10O75494 262 aaKnown RBP18.95■□□□□ 0.62
CPSF1-202ENST00000527827 DCTN3O75935 186 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 ZNF728P0DKX0 622 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 DYNLT3P51808 116 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 ERVK11-1P61568 191 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 ZNF829Q3KNS6 432 aaPredicted RBP18.95■□□□□ 0.62
CPSF1-202ENST00000527827 CLVS2Q5SYC1 327 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 ASRGL1Q7L266 308 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 ADGRG5Q8IZF4 528 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 HS3ST5Q8IZT8 346 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 V9GYS6 101 aa18.95■□□□□ 0.62
CPSF1-202ENST00000527827 DLGAP1O14490 977 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 PEX14O75381 377 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 RBP4P02753 201 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 IGHV1-8P0DP01 117 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 IGLL1P15814 213 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 RIDAP52758 137 aaKnown RBP18.94■□□□□ 0.62
CPSF1-202ENST00000527827 COL10A1Q03692 680 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 LCN1P1Q5VSP4 162 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 ASB17Q8WXJ9 295 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 OCSTAMPQ9BR26 566 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 SLC25A19Q9HC21 320 aa18.94■□□□□ 0.62
CPSF1-202ENST00000527827 COL7A1Q02388 2944 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 A0A1B0GTI1 187 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 ZNF737O75373 536 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 VDAC2P45880 294 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-202ENST00000527827 CD83Q01151 205 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 TCF23Q7RTU1 214 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 ANGPTL5Q86XS5 388 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 ASCC1Q8N9N2 400 aaKnown RBP18.93■□□□□ 0.62
CPSF1-202ENST00000527827 IKZF2Q9UKS7 526 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 SLC22A13Q9Y226 551 aa18.93■□□□□ 0.62
CPSF1-202ENST00000527827 A0A1W2PRX2 142 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 A6NIN4 97 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 MPIG6BO95866 241 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 CD33P20138 364 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 PRKACGP22612 351 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 DYNC1I2Q13409 638 aaKnown RBP18.92■□□□□ 0.62
CPSF1-202ENST00000527827 ARSJQ5FYB0 599 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-202ENST00000527827 OR14K1Q8NGZ2 314 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 ASB9Q96DX5 294 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 PKIBQ9C010 78 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 ZNF556Q9HAH1 456 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 TMEM14AQ9Y6G1 99 aa18.92■□□□□ 0.62
CPSF1-202ENST00000527827 LOC110117498-PIK3R3F6TDL0 507 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 F8VVB4 439 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 F8VWA3 439 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 K7EIL1 84 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 F2RL2O00254 374 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 GNGT2O14610 69 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 EDDM3BP56851 147 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 OR12D2P58182 307 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 ESRRGP62508 458 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 IL24Q13007 206 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 SNAPC1Q16533 368 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 Q6ZSR3 168 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 ELMOD2Q8IZ81 293 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 OR5AU1Q8NGC0 362 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 NSL1Q96IY1 281 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 LRGUKQ96M69 825 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 APOL4Q9BPW4 351 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 TVP23BQ9NYZ1 205 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 GTF2A1LQ9UNN4 478 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 HILPDAQ9Y5L2 63 aa18.91■□□□□ 0.62
CPSF1-202ENST00000527827 FAM90A22PA8MWA6 464 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 MAGEB4O15481 346 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-202ENST00000527827 CHRM2P08172 466 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 VAX1Q5SQQ9 334 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 CANT1Q8WVQ1 401 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 CCDC124Q96CT7 223 aaKnown RBP18.9■□□□□ 0.62
CPSF1-202ENST00000527827 ZNF714Q96N38 554 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 MOB1AQ9H8S9 216 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 DNAJB9Q9UBS3 223 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 R4GMQ9 66 aa18.9■□□□□ 0.62
CPSF1-202ENST00000527827 E2F6O75461 281 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms