RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 FOXB2Q5VYV0 432 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 TMEM236Q5W0B7 351 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 STUMQ69YW2 141 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PLBD1Q6P4A8 553 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 METAP1DQ6UB28 335 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 ZNF782Q6ZMW2 699 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 ZNF788Q6ZQV5 615 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 MOB3CQ70IA8 216 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ERI1Q8IV48 349 aaKnown RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 DYNAPQ8N1N2 210 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 OR6N2Q8NGY6 317 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 OR2T27Q8NH04 317 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ANGPTL6Q8NI99 470 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PIFOQ8TCI5 191 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 HAVCR2Q8TDQ0 301 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 FBLIM1Q8WUP2 373 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 THEM6Q8WUY1 208 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ITFG2Q969R8 447 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PHF21AQ96BD5 680 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 MED30Q96HR3 178 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ZNF488Q96MN9 340 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 HIST1H2AAQ96QV6 131 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 TEAD3Q99594 435 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ABHD6Q9BV23 337 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 YIPF3Q9GZM5 350 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 FAM234AQ9H0X4 552 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 OR51V1Q9H2C8 321 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 INPP5EQ9NRR6 644 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 C19orf12Q9NSK7 152 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PLCXD1Q9NUJ7 323 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 MRPS18AQ9NVS2 196 aaKnown RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 NECAP2Q9NVZ3 263 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 NLKQ9UBE8 527 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 BLOC1S6Q9UL45 172 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 RPL36Q9Y3U8 105 aaKnown RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 MAB21L2Q9Y586 359 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 COMMD3-BMI1R4GMX3 469 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 TET2Q6N021 2002 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 PLXNB1O43157 2135 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 IGKV1D-17A0A075B6S4 117 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 hCG_38984A0A1B0GV85 526 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 MEGF11A6BM72 1044 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 RFPL4AA6NLU0 287 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ZNF732B4DXR9 585 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ZNF878C9JN71 531 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 RFPL4AL1F8VTS6 287 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 PSMD9O00233 223 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 SIGLEC5O15389 551 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 DENRO43583 198 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 FADS2O95864 444 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 APOC1P02654 83 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 H2BFMP0C1H6 154 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CCDC159P0C7I6 412 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 PSG2P11465 335 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CCL3L1P16619 93 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CD33P20138 364 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ACKR3P25106 362 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 SLC15A1P46059 708 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ISL1P61371 349 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 RPS7P62081 194 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 BLCAPP62952 87 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ACTC1P68032 377 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ACTA1P68133 377 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 IL5RAQ01344 420 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 EMX1Q04741 257 aaPredicted RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 ACSM1Q08AH1 577 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 RAB40BQ12829 278 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 MED21Q13503 144 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 APOFQ13790 326 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 KLHL22Q53GT1 634 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ATPAF1Q5TC12 328 aaPredicted RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 TMEM200BQ69YZ2 307 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 DEGS2Q6QHC5 323 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 ENTHD1Q8IYW4 607 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 OR4S1Q8NGB4 309 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ASB17Q8WXJ9 295 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 OR5P3Q8WZ94 311 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CFHR4Q92496 578 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 PPP1R14AQ96A00 147 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 SPSB4Q96A44 273 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 LYZL4Q96KX0 146 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 INTS14Q96SY0 518 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CNN2Q99439 309 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 RTL8AQ9BWD3 113 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 YTHDF1Q9BYJ9 559 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 NPFFR1Q9GZQ6 430 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 MEGF9Q9H1U4 602 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 OR10A2Q9H208 303 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 METTL8Q9H825 291 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 NIPAL2Q9H841 368 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 ZNF702PQ9H963 129 aa5.33□□□□□ -1.56
CD44-221ENST00000526000 CNOT2Q9NZN8 540 aaKnown RBP5.33□□□□□ -1.56
CD44-221ENST00000526000 WI2-2373I1.2A0A1W2PRP0 233 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 CCDC182A6NF36 153 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 EFCAB10A6NFE3 127 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 A6NIN4 97 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 ACOD1A6NK06 481 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 ADARB2-AS1A8MUL3 147 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 K7EIL1 84 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms