RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 WDR34Q96EX3 536 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 MRPL48Q96GC5 212 aaKnown RBP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 BIRC8Q96P09 236 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 METTL26Q96S19 204 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 RSG1Q9BU20 258 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF355PQ9NSJ1 428 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 RBM22Q9NW64 420 aaKnown RBP eCLIP2.86□□□□□ -1.95
CSDE1-211ENST00000525970 C1orf109Q9NX04 203 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 FBXL3Q9UKT7 428 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 TMEM14AQ9Y6G1 99 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 DYSFO75923 2080 aa2.86□□□□□ -1.95
CSDE1-211ENST00000525970 A0A1B0GXF2 115 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 KLRC4-KLRK1H3BQV0 150 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 TCAPO15273 167 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 AQP9O43315 295 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 E2F6O75461 281 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 IGLV3-25P01717 112 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 RPA3P35244 121 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 LAMTOR4Q0VGL1 99 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 RAB31Q13636 194 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 TRIP13Q15645 432 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 GUSBP11Q6P575 273 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 IGFL2Q6UWQ7 119 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 Q6ZSR6 202 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 LINC01551Q86U37 167 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 RNF10Q8N5U6 811 aaKnown RBP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 NECAP1Q8NC96 275 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 C17orf50Q8WW18 174 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF382Q96SR6 550 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 LHX5Q9H2C1 402 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 ABCB9Q9NP78 766 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 EXOSC4Q9NPD3 245 aaKnown RBP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 FARSAQ9Y285 508 aaKnown RBP2.85□□□□□ -1.95
CSDE1-211ENST00000525970 LRRC42Q9Y546 428 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 IGSF9BQ9UPX0 1349 aa2.85□□□□□ -1.95
CSDE1-211ENST00000525970 ANKRD12Q6UB98 2062 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 C1orf232A0A0U1RR37 186 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 OR2AT4A6NND4 320 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 J3QLI3 93 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 TOX3O15405 576 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-211ENST00000525970 EIF1BO60739 113 aaKnown RBP2.84□□□□□ -1.95
CSDE1-211ENST00000525970 SPAG7O75391 227 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 ZNF688P0C7X2 276 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 LIMS3P0CW19 117 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 LIMS4P0CW20 117 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CD40LGP29965 261 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 TSPOP30536 169 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 EIF1P41567 113 aaKnown RBP2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CXCL12P48061 93 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 GCLMP48507 274 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 TTPAP49638 278 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 PSMB2P49721 201 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 PMVKQ15126 192 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 MAPRE2Q15555 327 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 TEX30Q5JUR7 227 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CLLU1OSQ5K130 101 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CLEC12AQ5QGZ9 265 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CYB561D1Q8N8Q1 229 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 OR10G2Q8NGC3 310 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 ACTL9Q8TC94 416 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 DDI1Q8WTU0 396 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 QKIQ96PU8 341 aaKnown RBP eCLIP2.84□□□□□ -1.952e-14■■■□□ 16.7
CSDE1-211ENST00000525970 NUDT9Q9BW91 350 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 MFSD1Q9H3U5 465 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 ASCL3Q9NQ33 180 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 CA10Q9NS85 328 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 DNAJC27Q9NZQ0 273 aa2.84□□□□□ -1.95
CSDE1-211ENST00000525970 SETD1AO15047 1707 aaKnown RBP2.84□□□□□ -1.96
CSDE1-211ENST00000525970 DOCK8Q8NF50 2099 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 COL16A1Q07092 1604 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 ISPDA4D126 451 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 FABP7O15540 132 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 SYNGR1O43759 233 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 NIPSNAP2O75323 286 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 MYO1DO94832 1006 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 MPZL1O95297 269 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 CD74P04233 296 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 IGKV5-2P06315 115 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 OR56A5P0C7T3 313 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 OCMP0CE72 109 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 TAC1P20366 129 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 ME2P23368 584 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 GRB2P62993 217 aaKnown RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 Q499Y3 187 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 NIPAL1Q6NVV3 410 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 PLEKHG7Q6ZR37 379 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 CCNYL1Q8N7R7 359 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 TTLQ8NG68 377 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 OR4M2Q8NGB6 313 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 OR5AK3PQ8NH89 298 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 FAM45AQ8TCE6 357 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 DYNC2LI1Q8TCX1 351 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms