RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MALSU1Q96EH3 234 aa19.29■□□□□ 0.68
USP47-205ENST00000525257 NUFIP1Q9UHK0 495 aaKnown RBP19.29■□□□□ 0.68
USP47-205ENST00000525257 GTF2A1LQ9UNN4 478 aa19.29■□□□□ 0.68
USP47-205ENST00000525257 POLDIP2Q9Y2S7 368 aa19.29■□□□□ 0.68
USP47-205ENST00000525257 MPIG6BO95866 241 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 IGLL1P15814 213 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 JUNBP17275 347 aaPredicted RBP19.28■□□□□ 0.68
USP47-205ENST00000525257 CD33P20138 364 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 VDAC2P45880 294 aaPredicted RBP19.28■□□□□ 0.68
USP47-205ENST00000525257 ESRRGP62508 458 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 BLCAPP62952 87 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 CDK5Q00535 292 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 DYNC1I2Q13409 638 aaKnown RBP19.28■□□□□ 0.68
USP47-205ENST00000525257 ZNF829Q3KNS6 432 aaPredicted RBP19.28■□□□□ 0.68
USP47-205ENST00000525257 CLVS2Q5SYC1 327 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 ZNF626Q68DY1 528 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 ASCC1Q8N9N2 400 aaKnown RBP19.28■□□□□ 0.68
USP47-205ENST00000525257 HES4Q9HCC6 221 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 ARL2BPQ9Y2Y0 163 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 COL7A1Q02388 2944 aa19.28■□□□□ 0.68
USP47-205ENST00000525257 PQLC2LA1A4F0 135 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 B2RBV5 119 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 DCTN3O75935 186 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 TTRP02766 147 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 ZNF728P0DKX0 622 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 OSMP13725 252 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 COL10A1Q03692 680 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 TMEM236Q5W0B7 351 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 ZNF679Q8IYX0 411 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 CHID1Q9BWS9 393 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 IKZF2Q9UKS7 526 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 COPS3Q9UNS2 423 aa19.27■□□□□ 0.68
USP47-205ENST00000525257 A6NIN4 97 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 K7N7A8 449 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 F2RL2O00254 374 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 ZNF254O75437 659 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 MNAT1P51948 309 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 RIDAP52758 137 aaKnown RBP19.26■□□□□ 0.67
USP47-205ENST00000525257 EDDM3BP56851 147 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 ROM1Q03395 351 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 HS3ST5Q8IZT8 346 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 ARHGAP24Q8N264 748 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 OR11H6Q8NGC7 330 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 ZNF556Q9HAH1 456 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 SLC22A13Q9Y226 551 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 HILPDAQ9Y5L2 63 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 DSCAML1Q8TD84 2053 aa19.26■□□□□ 0.67
USP47-205ENST00000525257 CCDC182A6NF36 153 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 GNGT2O14610 69 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 IGHV1-8P0DP01 117 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 MPZP25189 248 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 OR12D2P58182 307 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 TMEM42Q69YG0 159 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 ANGPTL5Q86XS5 388 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 LRGUKQ96M69 825 aa19.25■□□□□ 0.67
USP47-205ENST00000525257 DLGAP1O14490 977 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 RBP4P02753 201 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 ALDOBP05062 364 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 PF4V1P10720 104 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 DYNLT3P51808 116 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 ERVK11-1P61568 191 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 SLC34A1Q06495 639 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 VAX1Q5SQQ9 334 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 LCN1P1Q5VSP4 162 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 GDPD3Q7L5L3 318 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 ADGRG5Q8IZF4 528 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 OR5AU1Q8NGC0 362 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 ASB17Q8WXJ9 295 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 CCDC124Q96CT7 223 aaKnown RBP19.24■□□□□ 0.67
USP47-205ENST00000525257 TMEM14AQ9Y6G1 99 aa19.24■□□□□ 0.67
USP47-205ENST00000525257 LOC110117498-PIK3R3F6TDL0 507 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 E2F6O75461 281 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 SRSF10O75494 262 aaKnown RBP19.23■□□□□ 0.67
USP47-205ENST00000525257 PRKACGP22612 351 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 SNAPC1Q16533 368 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 BCL2L15Q5TBC7 163 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 TCF23Q7RTU1 214 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 WFDC9Q8NEX5 89 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 TRMT10AQ8TBZ6 339 aaKnown RBP19.23■□□□□ 0.67
USP47-205ENST00000525257 ZNF714Q96N38 554 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 OCSTAMPQ9BR26 566 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 TEX12Q9BXU0 123 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 SLC25A19Q9HC21 320 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 TVP23BQ9NYZ1 205 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.23■□□□□ 0.67
USP47-205ENST00000525257 V9GYS6 101 aa19.23■□□□□ 0.67
USP47-205ENST00000525257 DNAH9Q9NYC9 4486 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 K7EIL1 84 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 MAGEB4O15481 346 aaPredicted RBP19.22■□□□□ 0.67
USP47-205ENST00000525257 ZNF737O75373 536 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 ACTA2P62736 377 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 ACTG2P63267 376 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 ACTC1P68032 377 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 ACTA1P68133 377 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 CD83Q01151 205 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 PLEKHG7Q6ZR37 379 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 PIGWQ7Z7B1 504 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 OR14K1Q8NGZ2 314 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 NDNFQ8TB73 568 aa19.22■□□□□ 0.67
USP47-205ENST00000525257 ASB9Q96DX5 294 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms