RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CCDC122Q5T0U0 273 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 LCE3AQ5TA76 89 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 Q6ZVH6 145 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 PID1Q7Z2X4 250 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CD302Q8IX05 232 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 C10orf67Q8IYJ2 551 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 SYS1Q8N2H4 156 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ARHGAP18Q8N392 663 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RNF175Q8N4F7 328 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 SNX31Q8N9S9 440 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR8U1Q8NH10 309 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR5W2Q8NH69 310 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CIRBP-AS1Q8TBR5 109 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 EXOSC8Q96B26 276 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 DCPSQ96C86 337 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 HAUS1Q96CS2 278 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNF414Q96IQ9 312 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CYYR1Q96J86 154 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CAPZA3Q96KX2 299 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 BMFQ96LC9 184 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNF285Q96NJ3 590 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TIMM17AQ99595 171 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RAB1BQ9H0U4 201 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ARMC7Q9H6L4 198 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMEM27Q9HBJ8 222 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 CSNK1G1Q9HCP0 422 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNF302Q9NR11 478 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 AGPAT3Q9NRZ7 376 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNHIT6Q9NWK9 470 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 GUCA1BQ9UMX6 200 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 PSG11Q9UQ72 335 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 SIGLEC9Q9Y336 463 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 RBMX2Q9Y388 322 aaKnown RBP2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 SCN8AQ9UQD0 1980 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 MYO3BQ8WXR4 1341 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 ANKRD12Q6UB98 2062 aa2.1□□□□□ -2.07
HMGN1P28-201ENST00000521340 TRPM7Q96QT4 1865 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 CABIN1Q9Y6J0 2220 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGKV6D-41A0A0C4DH26 115 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 LOC100506127A0A0U1RQW1 187 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PVALEFA0A1B0GWK0 134 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ANKRD20A5PA0PJZ0 165 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNF233A6NK53 670 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 BTNL10A8MVZ5 291 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 RSPH10B2B2RC85 870 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 GOLGA8KD6RF30 607 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMX2-CTNND1H3BSU7 103 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 M0QX08 132 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PSMD11O00231 422 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 TNFRSF11BO00300 401 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 BPY2O14599 106 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 B4GALT5O43286 388 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 CHMP2AO43633 222 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLC37A4O43826 429 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 RDH16O75452 317 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 GLSO94925 669 aaPredicted RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PAEPP09466 180 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 RSPH10BP0C881 870 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 MAGP20916 626 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 HTR1DP28221 377 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 HTR2CP28335 458 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 GGT2P36268 569 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 HSPA9P38646 679 aaKnown RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PPOXP50336 477 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 HCCSP53701 268 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 UCNP55089 124 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 MLF1P58340 268 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ARG2P78540 354 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 CRADDP78560 199 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 MAD2L1BPQ15013 274 aaPredicted RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR1Q1Q15612 314 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 VAMP3Q15836 100 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 UAP1Q16222 522 aaPredicted RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PRSS8Q16651 343 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 Q3ZCU0 254 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 RNASE13Q5GAN3 156 aaKnown RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 C6orf183Q5T699 404 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMEM236Q5W0B7 351 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 STEAP4Q687X5 459 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 C8orf74Q6P047 294 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMPRSS11AQ6ZMR5 421 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 SAXO1Q8IYX7 474 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 Q8N9L7 120 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR10G2Q8NGC3 310 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ASZ1Q8WWH4 475 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 RCN3Q96D15 328 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 CENPNQ96H22 339 aaPredicted RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 KCNS1Q96KK3 526 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ALS2CR12Q96Q35 445 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 TMEM243Q9BU79 118 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 GGTLC1Q9BX51 225 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLC17A9Q9BYT1 436 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 PLA2G2FQ9BZM2 168 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 FGF23Q9GZV9 251 aaPredicted RBP2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 FAM107BQ9H098 131 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 ASB8Q9H765 288 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 C8orf17Q9NRJ1 99 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 POFUT2Q9Y2G5 429 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 MYO10Q9HD67 2058 aa2.09□□□□□ -2.07
HMGN1P28-201ENST00000521340 DOCK4Q8N1I0 1966 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms