RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 KLHDC2Q9Y2U9 406 aa13.14□□□□□ -0.31
TRAM1-204ENST00000521049 HILPDAQ9Y5L2 63 aa13.14□□□□□ -0.31
TRAM1-204ENST00000521049 PRR23D1E9PI22 279 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 PRODHO43272 600 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 PRR23D2P0DMB1 279 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 JUNBP17275 347 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 KCTD18Q6PI47 426 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-204ENST00000521049 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 AKR1E2Q96JD6 320 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 NIPSNAP1Q9BPW8 284 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 PBOV1Q9GZY1 135 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 LAMP5Q9UJQ1 280 aa13.13□□□□□ -0.31
TRAM1-204ENST00000521049 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 H3BN98 237 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 CHRM2P08172 466 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 MPZP25189 248 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ACTA2P62736 377 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ACTG2P63267 376 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ACTC1P68032 377 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ACTA1P68133 377 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 COL10A1Q03692 680 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 SLC35D3Q5M8T2 416 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 TMEM42Q69YG0 159 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 COMMD2Q86X83 199 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 DPF1Q92782 380 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 ZNF714Q96N38 554 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 TEAD3Q99594 435 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 MROQ9BYG7 248 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 REEP1Q9H902 201 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 LIN7BQ9HAP6 207 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 SAMHD1Q9Y3Z3 626 aaKnown RBP13.12□□□□□ -0.31
TRAM1-204ENST00000521049 U3KQV3 271 aa13.12□□□□□ -0.31
TRAM1-204ENST00000521049 DLGAP1O14490 977 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 ZNF737O75373 536 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 ZNF254O75437 659 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 DHRS3O75911 302 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
TRAM1-204ENST00000521049 EDDM3BP56851 147 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 IL18R1Q13478 541 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 CLVS2Q5SYC1 327 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 OR2T5Q6IEZ7 315 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
TRAM1-204ENST00000521049 OR2T29Q8NH02 315 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 NDNFQ8TB73 568 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 YIPF3Q9GZM5 350 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 MAGIXQ9H6Y5 334 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 TAS2R1Q9NYW7 299 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 ACTR3BQ9P1U1 418 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
TRAM1-204ENST00000521049 IGHV2-26A0A0B4J1V2 119 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 hADV38S2A0JD32 116 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 HMGN1P05114 100 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 NHLRC4P0CG21 123 aaPredicted RBP13.1□□□□□ -0.31
TRAM1-204ENST00000521049 HTR1DP28221 377 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 HCCSP53701 268 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 IL24Q13007 206 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 GK3PQ14409 553 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 GINS1Q14691 196 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 CYP2R1Q6VVX0 501 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 ASRGL1Q7L266 308 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 OR10G2Q8NGC3 310 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 SNX22Q96L94 193 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 FEVQ99581 238 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 PKIBQ9C010 78 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
TRAM1-204ENST00000521049 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
TRAM1-204ENST00000521049 MEX3AA1L020 520 aaKnown RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 E2F6O75461 281 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 DNAJC8O75937 253 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 LPLP06858 475 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 BRS3P32247 399 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 ROM1Q03395 351 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 TCF23Q7RTU1 214 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 MRPL41Q8IXM3 137 aaKnown RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 ZNF679Q8IYX0 411 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 BATF2Q8N1L9 274 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 STMN2Q93045 179 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 MCRIP2Q9BUT9 160 aaKnown RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 CLEC7AQ9BXN2 247 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 SEBOXQ9HB31 216 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-204ENST00000521049 GPR173Q9NS66 373 aa13.09□□□□□ -0.31
TRAM1-204ENST00000521049 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms