RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 NRIP2Q9BQI9 281 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 PBOV1Q9GZY1 135 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 HES4Q9HCC6 221 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 GPR84Q9NQS5 396 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 INPP5EQ9NRR6 644 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 VNN3Q9NY84 501 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.62□□□□□ -0.39
LMNA-223ENST00000515459 MINOS1-NBL1R4GNA1 71 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 MEX3AA1L020 520 aaKnown RBP12.61□□□□□ -0.39
LMNA-223ENST00000515459 FAM90A22PA8MWA6 464 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
LMNA-223ENST00000515459 ACTA2P62736 377 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 ACTG2P63267 376 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 ACTC1P68032 377 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 ACTA1P68133 377 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 COL10A1Q03692 680 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 OR2T5Q6IEZ7 315 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
LMNA-223ENST00000515459 DEGS2Q6QHC5 323 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 OR2T29Q8NH02 315 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 DPF1Q92782 380 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 AKR1E2Q96JD6 320 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 ZNF714Q96N38 554 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 MROQ9BYG7 248 aa12.61□□□□□ -0.39
LMNA-223ENST00000515459 PSMD9O00233 223 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 DHRS3O75911 302 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 HCCSP53701 268 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
LMNA-223ENST00000515459 KHDC1LQ5JSQ8 128 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 SLC35D3Q5M8T2 416 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 TEAD3Q99594 435 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 ELAC2Q9BQ52 826 aaKnown RBP12.6□□□□□ -0.39
LMNA-223ENST00000515459 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 MAGIXQ9H6Y5 334 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 ACTR3BQ9P1U1 418 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 SLC22A13Q9Y226 551 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 RYR3Q15413 4870 aa12.6□□□□□ -0.39
LMNA-223ENST00000515459 PQLC2LA1A4F0 135 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 DLGAP1O14490 977 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 ZNF737O75373 536 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
LMNA-223ENST00000515459 CHRM2P08172 466 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 ATP6V1B2P21281 511 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 MPZP25189 248 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 IL18R1Q13478 541 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
LMNA-223ENST00000515459 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 ZNF676Q8N7Q3 588 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 LINC00482Q8N8I6 264 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 CAPSLQ8WWF8 208 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 FEVQ99581 238 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 GPR173Q9NS66 373 aa12.59□□□□□ -0.39
LMNA-223ENST00000515459 NUFIP1Q9UHK0 495 aaKnown RBP12.59□□□□□ -0.39
LMNA-223ENST00000515459 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.59□□□□□ -0.39
LMNA-223ENST00000515459 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 hADV38S2A0JD32 116 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 ZNF254O75437 659 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 LPLP06858 475 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 ESRRGP62508 458 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 MEF2CQ06413 473 aaPredicted RBP12.58□□□□□ -0.4
LMNA-223ENST00000515459 GINS1Q14691 196 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 ZNF829Q3KNS6 432 aaPredicted RBP12.58□□□□□ -0.4
LMNA-223ENST00000515459 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 C16orf89Q6UX73 402 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 ZBTB49Q6ZSB9 765 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 OR8H2Q8N162 312 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
LMNA-223ENST00000515459 TCRBV5S2A0A599 114 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 TTRP02766 147 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 HMGN1P05114 100 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 SLC2A5P22732 501 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 HTR1DP28221 377 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 BRS3P32247 399 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 ROM1Q03395 351 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 IL24Q13007 206 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 GK3PQ14409 553 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 ABCA11PQ4W5N1 156 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 C10orf99Q6UWK7 81 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 ANGPTL5Q86XS5 388 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 ZNF679Q8IYX0 411 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 BBS1Q8NFJ9 593 aa12.57□□□□□ -0.4
LMNA-223ENST00000515459 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms