RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZFP57Q9NU63 452 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 MINOS1-NBL1R4GNA1 71 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 hCG_38984A0A1B0GV85 526 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 OR6C68A6NDL8 312 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 EI24O14681 340 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 IDH3BO43837 385 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 APOC1P02654 83 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 LPLP06858 475 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 ANXA8P13928 327 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 HIST1H1CP16403 213 aaKnown RBP9.21□□□□□ -0.94
RNF4-216ENST00000511859 CCL3L1P16619 93 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 SLC15A1P46059 708 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 SLC34A1Q06495 639 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 GK3PQ14409 553 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 C10orf99Q6UWK7 81 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 ZNF782Q6ZMW2 699 aaPredicted RBP9.21□□□□□ -0.94
RNF4-216ENST00000511859 KCTD8Q6ZWB6 473 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 DCXRQ7Z4W1 244 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 THAP5Q7Z6K1 395 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 OSR2Q8N2R0 312 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 CBR4Q8N4T8 237 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 ZNF561Q8N587 486 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 OR8D4Q8NGM9 314 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 ZNF671Q8TAW3 534 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 OR5P3Q8WZ94 311 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 EME1Q96AY2 570 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 NRBF2Q96F24 287 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 RNF170Q96K19 258 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 P2RX4Q99571 388 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 SLC29A1Q99808 456 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 KRT84Q9NSB2 600 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 CENPMQ9NSP4 180 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 RASL12Q9NYN1 266 aa9.21□□□□□ -0.94
RNF4-216ENST00000511859 ARRDC5A6NEK1 342 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 H3BN98 237 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 SLC1A7O00341 560 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 RBP4P02753 201 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 PGA5P0DJD9 388 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 PEX2P28328 305 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 SLC6A6P31641 620 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 DCTDP32321 178 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 RPS27P42677 84 aaKnown RBP9.2□□□□□ -0.94
RNF4-216ENST00000511859 ENTPD1P49961 510 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 RPL23AP62750 156 aaKnown RBP9.2□□□□□ -0.94
RNF4-216ENST00000511859 GRB2P62993 217 aaKnown RBP9.2□□□□□ -0.94
RNF4-216ENST00000511859 ABCA11PQ4W5N1 156 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 FAHD1Q6P587 224 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 RASSF6Q6ZTQ3 369 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 IQCF1Q8N6M8 205 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 OR4M1Q8NGD0 313 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 SLAMF6Q96DU3 332 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 PRR25Q96S07 402 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 IFT27Q9BW83 186 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 TSSK6Q9BXA6 273 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 GABARAPL1Q9H0R8 117 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 RGCCQ9H4X1 137 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 PAPOLBQ9NRJ5 636 aaKnown RBP9.2□□□□□ -0.94
RNF4-216ENST00000511859 TBC1D23Q9NUY8 699 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 CDH10Q9Y6N8 788 aa9.2□□□□□ -0.94
RNF4-216ENST00000511859 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 RFPL4AA6NLU0 287 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ZNF850A8MQ14 1090 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ZNF878C9JN71 531 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 RFPL4AL1F8VTS6 287 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 MTRF1O75570 445 aaKnown RBP9.19□□□□□ -0.94
RNF4-216ENST00000511859 ATP6V1G2O95670 118 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 CST4P01036 141 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ANXA2P07355 339 aaKnown RBP9.19□□□□□ -0.94
RNF4-216ENST00000511859 DLX6P56179 175 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 PRDX4Q13162 271 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 DYNC1I2Q13409 638 aaKnown RBP9.19□□□□□ -0.94
RNF4-216ENST00000511859 IL18R1Q13478 541 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ZNF273Q14593 569 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
RNF4-216ENST00000511859 KLHL12Q53G59 568 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 SLC35F1Q5T1Q4 408 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 C9orf66Q5T8R8 295 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 TMEM236Q5W0B7 351 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 KDM4DQ6B0I6 523 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 TIGD4Q8IY51 512 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 OR52L1Q8NGH7 329 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 C9orf16Q9BUW7 83 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 OSBPL10Q9BXB5 764 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 RIBC2Q9H4K1 309 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 SMAD5-AS1Q9Y6J3 95 aa9.19□□□□□ -0.94
RNF4-216ENST00000511859 IGHV1-8P0DP01 117 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 OSMP13725 252 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 JUNBP17275 347 aaPredicted RBP9.18□□□□□ -0.94
RNF4-216ENST00000511859 EPHA2P29317 976 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 PRDX2P32119 198 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 BRS3P32247 399 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 POLR2IP36954 125 aaKnown RBP9.18□□□□□ -0.94
RNF4-216ENST00000511859 ECI1P42126 302 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 CX3CR1P49238 355 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 CD300LDQ6UXZ3 194 aa9.18□□□□□ -0.94
RNF4-216ENST00000511859 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms