RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 DGCR6LQ9BY27 220 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 PIGLQ9Y2B2 252 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 U3KQV3 271 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 RBP4P02753 201 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 RIPPLY1Q0D2K3 151 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 PLBD1Q6P4A8 553 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 OR51E1Q8TCB6 317 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 NRIP2Q9BQI9 281 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 GPR84Q9NQS5 396 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 FAM206AQ9NX38 181 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 ENPP5Q9UJA9 477 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
CXCL1-202ENST00000509101 PRR23D1E9PI22 279 aaPredicted RBP12.78□□□□□ -0.36
CXCL1-202ENST00000509101 H3BN98 237 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 K7N7A8 449 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 PSMD9O00233 223 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 GSC2O15499 205 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 NOS1APO75052 506 aaPredicted RBP12.78□□□□□ -0.36
CXCL1-202ENST00000509101 NRASP01111 189 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 LPLP06858 475 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 PRR23D2P0DMB1 279 aaPredicted RBP12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ATP6V1B1P15313 513 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ACTA2P62736 377 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ACTG2P63267 376 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ACTC1P68032 377 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ACTA1P68133 377 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 COL10A1Q03692 680 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 MICAQ29983 383 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 CYP2R1Q6VVX0 501 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ZNF573Q86YE8 665 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 BCAS4Q8TDM0 211 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 NIPSNAP1Q9BPW8 284 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 GPR173Q9NS66 373 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 SLC22A13Q9Y226 551 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
CXCL1-202ENST00000509101 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.36
CXCL1-202ENST00000509101 TMEM269A0A1B0GVZ9 245 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 FAM90A22PA8MWA6 464 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 ATP6V1B2P21281 511 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 CD24P25063 80 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 MAGEA2P43356 314 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 HCCSP53701 268 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 ABCA11PQ4W5N1 156 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 ASRGL1Q7L266 308 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 GDPD3Q7L5L3 318 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 C16orf82Q7Z2V1 217 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 TEAD3Q99594 435 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 TTTY10Q9BZA0 68 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 PBOV1Q9GZY1 135 aa12.77□□□□□ -0.37
CXCL1-202ENST00000509101 SAMHD1Q9Y3Z3 626 aaKnown RBP12.77□□□□□ -0.37
CXCL1-202ENST00000509101 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 IGHV2-26A0A0B4J1V2 119 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 SH2D7A6NKC9 451 aaPredicted RBP12.76□□□□□ -0.37
CXCL1-202ENST00000509101 H3BUI4 141 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 DHRS3O75911 302 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 IGLV3-1P01715 115 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 CHRM2P08172 466 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 ALOX5APP20292 161 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 CALB2P22676 271 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 RPS7P62081 194 aaKnown RBP12.76□□□□□ -0.37
CXCL1-202ENST00000509101 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 BBS1Q8NFJ9 593 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 CAPSLQ8WWF8 208 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 REEP1Q9H902 201 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 NDE1Q9NXR1 346 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.76□□□□□ -0.37
CXCL1-202ENST00000509101 SESN1Q9Y6P5 492 aa12.76□□□□□ -0.37
CXCL1-202ENST00000509101 PQLC2LA1A4F0 135 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 ACOD1A6NK06 481 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 PRODHO43272 600 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 ZNF737O75373 536 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 DNAJC8O75937 253 aaPredicted RBP12.75□□□□□ -0.37
CXCL1-202ENST00000509101 MNAT1P51948 309 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 ESRRGP62508 458 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 MFGE8Q08431 387 aaPredicted RBP12.75□□□□□ -0.37
CXCL1-202ENST00000509101 IL18R1Q13478 541 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 DCTN2Q13561 401 aaKnown RBP12.75□□□□□ -0.37
CXCL1-202ENST00000509101 CLVS2Q5SYC1 327 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 RNF144BQ7Z419 303 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 MRPL41Q8IXM3 137 aaKnown RBP12.75□□□□□ -0.37
CXCL1-202ENST00000509101 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 RYR2Q92736 4967 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 CLEC7AQ9BXN2 247 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 LIN7BQ9HAP6 207 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms