RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 C10orf128Q5T292 105 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 OR2V1Q8NHB1 315 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ABHD3Q8WU67 409 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM230Q96A57 120 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 NABP1Q96AH0 204 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 FER1L6-AS2Q96M78 137 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 S100A13Q99584 98 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 TTTY12Q9BZ98 90 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 METTL8Q9H825 291 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 C14orf166Q9Y224 244 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 POMT1Q9Y6A1 747 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 CEP295Q9C0D2 2601 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 NCOA6Q14686 2063 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 DNPH1O43598 174 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 MTRF1O75570 445 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 IGLV3-1P01715 115 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 NAT2P11245 290 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 MSR1P21757 451 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 OR3A4PP47883 348 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 BLOC1S1P78537 153 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 SRYQ05066 204 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 PJVKQ0ZLH3 352 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 DHRS7BQ6IAN0 325 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 HAGHLQ6PII5 290 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 SLC16A14Q7RTX9 510 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 GALNTL5Q7Z4T8 443 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ZSCAN4Q8NAM6 433 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM104Q8NE00 496 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 GJC3Q8NFK1 279 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 OR51T1Q8NGJ9 327 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 CPNE2Q96FN4 548 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 IP6K3Q96PC2 410 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ALKBH3Q96Q83 286 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 RTBDNQ9BSG5 229 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 SF3B5Q9BWJ5 86 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 TM2D1Q9BX74 207 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ULBP2Q9BZM5 246 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 NELFAQ9H3P2 528 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ASCL3Q9NQ33 180 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 C1orf123Q9NWV4 160 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 MRPS18CQ9Y3D5 142 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 RTTNQ86VV8 2226 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 URB1O60287 2271 aaKnown RBP9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF407Q9C0G0 2248 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 F8W036 122 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 RRP8O43159 456 aaKnown RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 DHHO43323 396 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM157CP0CG43 387 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 CPT2P23786 658 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 PTGFRP43088 359 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 NPY4RP50391 375 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FOXC1Q12948 553 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 IL15RAQ13261 267 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ENDOGQ14249 297 aaKnown RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 CHRFAM7AQ494W8 412 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF585AQ6P3V2 769 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 Q6ZSR3 168 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 INTS12Q96CB8 462 aaKnown RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 PGAM5Q96HS1 289 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ARHGAP5-AS1Q96IT6 56 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM71F1Q96KD3 344 aaPredicted RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 SOX7Q9BT81 388 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF319Q9P2F9 582 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 LPAR3Q9UBY5 353 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 EDARQ9UNE0 448 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF175Q9Y473 711 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FOXI3A8MTJ6 420 aaPredicted RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 H0YIZ8 118 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 HPNP05981 417 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 LHX2P50458 406 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF133P52736 654 aaPredicted RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 SNU13P55769 128 aaKnown RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 KISS1Q15726 138 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM57BQ71RH2 274 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 C20orf196Q8IYI0 205 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM251Q8N6I4 163 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 POC1AQ8NBT0 407 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 SMIM8Q96KF7 97 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 BANF2Q9H503 90 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 CRLF2Q9HC73 371 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 ZFP57Q9NU63 452 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 B4GALT7Q9UBV7 327 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 V9GYS6 101 aa9.6□□□□□ -0.87
SH3RF1-203ENST00000508685 DMXL2Q8TDJ6 3036 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 DNAJC13O75165 2243 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 C5orf63A6NC05 138 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 OR5H15A6NDH6 313 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF705EA8MWA4 302 aaPredicted RBP9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 E9PLN8 166 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 NKX2-8O15522 239 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 DHRS3O75911 302 aa9.59□□□□□ -0.87
SH3RF1-203ENST00000508685 IFNA2P01563 188 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms