RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 IZUMO1Q8IYV9 350 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 ACBD4Q8NC06 268 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 CHST4Q8NCG5 386 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM104Q8NE00 496 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 ITLN2Q8WWU7 325 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 AQP3Q92482 292 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 YIPF5Q969M3 257 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 TRIM63Q969Q1 353 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 PLPPR2Q96GM1 343 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 NKX3-1Q99801 234 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 TLNRD1Q9H1K6 362 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 KCNK15Q9H427 330 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 BANF2Q9H503 90 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 HEATR1Q9H583 2144 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 PLEKHJ1Q9NW61 149 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 TAAR3PQ9P1P4 343 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 MYEF2Q9P2K5 600 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 GLS2Q9UI32 602 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 PLEKHA6Q9Y2H5 1048 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 RBMX2Q9Y388 322 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 RNF115Q9Y4L5 304 aa6.93□□□□□ -1.3
TOPBP1-202ENST00000503338 ATMQ13315 3056 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 IGKV1-12A0A0C4DH73 117 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 LYRM1O43325 122 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ANGPTL7O43827 346 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 LILRA1O75019 489 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 PLATP00750 562 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 IGKV1D-12P01611 117 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ADH4P08319 380 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 BLVRBP30043 206 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 APOBEC3AP31941 199 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 RCVRNP35243 200 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 CFHR2P36980 270 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 GDNFP39905 211 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 UQCRFS1P47985 274 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF81P51508 661 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 RBM11P57052 281 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 GNG2P59768 71 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 MRPS15P82914 257 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 DGCR2P98153 550 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 PLA2G7Q13093 441 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF154Q13106 437 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 IGFBP7Q16270 282 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ALKBH6Q3KRA9 238 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 DMRTC1Q5HYR2 192 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 RNF144BQ7Z419 303 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 OR10K1Q8NGX5 313 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 OR10Z1Q8NGY1 313 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 OR52I2Q8NH67 350 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 LINC01560Q8TB33 94 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 GPX8Q8TED1 209 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM222BQ8WU58 562 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 SLAMF9Q96A28 289 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ELMOD3Q96FG2 381 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 FGF23Q9GZV9 251 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 RBFOX1Q9NWB1 397 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 RASL12Q9NYN1 266 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 CRIM1Q9NZV1 1036 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 COPZ2Q9P299 210 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 IL19Q9UHD0 177 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 TBC1D24Q9ULP9 559 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 FZR1Q9UM11 496 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 ST3GAL6Q9Y274 331 aa6.92□□□□□ -1.3
TOPBP1-202ENST00000503338 BOD1L1Q8NFC6 3051 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A1W2PP11 408 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 A6NLC8 198 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FOXI3A8MTJ6 420 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 VGLL3A8MV65 326 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SHISA9B4DS77 424 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 B9A039 149 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 IFNL4K9M1U5 179 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MFNGO00587 321 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SOCS1O15524 211 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MLNRO43193 412 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ORC5O43913 435 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ZG16O60844 167 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PDCD6O75340 191 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SFTPBP07988 381 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 CD55P08174 381 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 CD3GP09693 182 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 OR4A8P0C604 315 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PGA5P0DJD9 388 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 TNFRSF1AP19438 455 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 TBPP20226 339 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 BCL3P20749 454 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FUT3P21217 361 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SERPINF1P36955 418 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 KIR2DL3P43628 341 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 GATA4P43694 442 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 TAS2R19P59542 299 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MADCAM1Q13477 382 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 EFNB3Q15768 340 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ADIPOQQ15848 244 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PCGF3Q3KNV8 242 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MOGAT2Q3SYC2 334 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ACTBL2Q562R1 376 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SPIN3Q5JUX0 258 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms