RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 BBS1Q8NFJ9 593 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 NRIP2Q9BQI9 281 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 PBOV1Q9GZY1 135 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 HES4Q9HCC6 221 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 GPR173Q9NS66 373 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 ENPP5Q9UJA9 477 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 SAMHD1Q9Y3Z3 626 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 ACOD1A6NK06 481 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 PRR32B1ATL7 298 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 RBP4P02753 201 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 CD24P25063 80 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ACTA2P62736 377 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ACTG2P63267 376 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ACTC1P68032 377 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ACTA1P68133 377 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 CD300LDQ6UXZ3 194 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ASRGL1Q7L266 308 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 TCF23Q7RTU1 214 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 CPOQ8IVL8 374 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 OR2T29Q8NH02 315 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 NDNFQ8TB73 568 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 FEVQ99581 238 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 REEP1Q9H902 201 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 LAMP5Q9UJQ1 280 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 SLC22A13Q9Y226 551 aa11.71□□□□□ -0.53
SEC61A1-207ENST00000498837 TCRBV5S2A0A599 114 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 A6NIN4 97 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 PRODHO43272 600 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 ZNF737O75373 536 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 DUS4LO95620 317 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 LPLP06858 475 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 GINS1Q14691 196 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 MINOS1Q5TGZ0 78 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 DEFB107AQ8IZN7 70 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 OR10G2Q8NGC3 310 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 ITFG2Q969R8 447 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 TTTY10Q9BZA0 68 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 POLDIP2Q9Y2S7 368 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 MINOS1-NBL1R4GNA1 71 aa11.7□□□□□ -0.54
SEC61A1-207ENST00000498837 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 F8VVB4 439 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 F8VWA3 439 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 DHRS3O75911 302 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 TTRP02766 147 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 SLC2A5P22732 501 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 MPZP25189 248 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 AZGP1P25311 298 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 MFGE8Q08431 387 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 ABCA11PQ4W5N1 156 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 KHDC1LQ5JSQ8 128 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 KCTD18Q6PI47 426 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 DEGS2Q6QHC5 323 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 GDPD3Q7L5L3 318 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 ZNF676Q8N7Q3 588 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 ARL8BQ9NVJ2 186 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 ACTR3BQ9P1U1 418 aa11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-207ENST00000498837 E9PQ18 207 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 MMP23AO75900 390 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 INMTO95050 263 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 CHRM2P08172 466 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 MRPL3P09001 348 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 ESRRGP62508 458 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 SLC35D3Q5M8T2 416 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 OR8H2Q8N162 312 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 GIPC3Q8TF64 312 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 MROQ9BYG7 248 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 YIPF3Q9GZM5 350 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 MAGIXQ9H6Y5 334 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 COPS3Q9UNS2 423 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 SESN1Q9Y6P5 492 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 STAB2Q8WWQ8 2551 aa11.68□□□□□ -0.54
SEC61A1-207ENST00000498837 TMEM82A0PJX8 343 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 H3BUI4 141 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 DLGAP1O14490 977 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 SRSF10O75494 262 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 CLIC3O95833 236 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 CDK5Q00535 292 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 APOFQ13790 326 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 LCN1P1Q5VSP4 162 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 BAIAP2L2Q6UXY1 529 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 ETV3LQ6ZN32 361 aa11.67□□□□□ -0.54
SEC61A1-207ENST00000498837 C16orf82Q7Z2V1 217 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms