RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 C11orf54Q9H0W9 315 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-210ENST00000498259 OR51I2Q9H344 312 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 BANF2Q9H503 90 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 MCUBQ9NWR8 336 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 RASL12Q9NYN1 266 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 TBC1D24Q9ULP9 559 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 NUBP2Q9Y5Y2 271 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 ZFHX4Q86UP3 3567 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 SVILO95425 2214 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 IGLV3-9A0A075B6K5 115 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 MCRIP1C9JLW8 97 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 ABCD4O14678 606 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 SH2D1BO14796 132 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 SPRY1O43609 319 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 ANGPTL7O43827 346 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 NOS1APO75052 506 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 GNB3P16520 340 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 TNFRSF1AP19438 455 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 ANOS1P23352 680 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 GABRR1P24046 479 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 SLC6A1P30531 599 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 CALCRP30988 508 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 RBM11P57052 281 aaKnown RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 NKX6-1P78426 367 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 MADCAM1Q13477 382 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 KLF9Q13886 244 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 ST3GAL2Q16842 350 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 RNASE10Q5GAN6 216 aaKnown RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 STEAP1BQ6NZ63 245 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 TRAPPC6BQ86SZ2 158 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 MYPOPQ86VE0 399 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 FAM58AQ8N1B3 248 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 FBXL14Q8N1E6 418 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 GTF3AQ92664 365 aaKnown RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 HPS1Q92902 700 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 MRPL24Q96A35 216 aaKnown RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 SLC25A21Q9BQT8 299 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-210ENST00000498259 OCSTAMPQ9BR26 566 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 CACNG6Q9BXT2 260 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 EGLN1Q9GZT9 426 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 POFUT1Q9H488 388 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 FN3KRPQ9HA64 309 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 CA10Q9NS85 328 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 FAIMQ9NVQ4 179 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 KLK11Q9UBX7 282 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 MGAT4AQ9UM21 535 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 ATP23Q9Y6H3 246 aa7.22□□□□□ -1.25
SF3A1-210ENST00000498259 INTS1Q8N201 2190 aaKnown RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IGKV1-27A0A075B6S5 117 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 A0A1B0GWJ7 208 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 A6NLC8 198 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 FAM90A27PA6NNH2 459 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 ATP6V1G2-DDX39BF2Z307 99 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IFNL4K9M1U5 179 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 PLA2G10O15496 165 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 SOCS1O15524 211 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 PRAF2O60831 178 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 PDCD6O75340 191 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR7C1O76099 320 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 NXPH2O95156 264 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 CLDN14O95500 239 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 RAB3DO95716 219 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 GRPP07492 148 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IRF2P14316 349 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 DTYMKP23919 212 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 MPV17P39210 176 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 MDH2P40926 338 aaKnown RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 CD200P41217 278 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 ECI1P42126 302 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR3A3P47888 321 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF81P51508 661 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 BTG1P62324 171 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 BSPH1Q075Z2 132 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 RBMS2Q15434 407 aaKnown RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 TAF9Q16594 264 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OLFML2AQ68BL7 652 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 VHLLQ6RSH7 139 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF782Q6ZMW2 699 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 C1QL2Q7Z5L3 287 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 CALHM1Q8IU99 346 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR2Z1Q8NG97 314 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR11L1Q8NGX0 322 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR10K1Q8NGX5 313 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR10Z1Q8NGY1 313 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 OR56B4Q8NH76 319 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 PPP1R35Q8TAP8 253 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 TMEM171Q8WVE6 324 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 EMG1Q92979 244 aaKnown RBP7.21□□□□□ -1.26
SF3A1-210ENST00000498259 SLAMF9Q96A28 289 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 ARHGAP5-AS1Q96IT6 56 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 WFIKKN1Q96NZ8 548 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 PECRQ9BY49 303 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 MS4A5Q9H3V2 200 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IFT22Q9H7X7 185 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 HRASLSQ9HDD0 168 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms